Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq97 123 3e-23 seq209 114 2e-20 seq86 111 2e-19 seq202 86.0 8e-12 seq117 86.0 8e-12 >seq97 Length=131314 Score = 123 bits (136), Expect = 3e-23 Identities = 126/162 (78%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 |||||||| | |||| |||| || || |||| || || || ||||||||||| || Sbjct 124702 TCCTTTGCCATGAGACTAGTCGCTTTCGCTTGTGCGGAAGGAATTTTCTTCTCTGGATCG 124643 Query 102231 TTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289 ||| ||| | || | ||||||||||||||| |||||| ||||||||||| | |||||| Sbjct 124642 TTC-GCGTCAATATTTTGGCTCAAGAAGCGTGGTCTCCTGCCAGGTCTCACGTACTCCAA 124584 Query 102290 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||| |||||||| |||||||| |||||| ||||| || Sbjct 124583 CGAGAGGATCTCTCGAGACGAGGGCCTCCACACCGAGTTCGC 124542 >seq209 Length=70723 Score = 114 bits (126), Expect = 2e-20 Identities = 160/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 ||||| ||||| | ||| | ||||| ||||| |||||||||| || ||||||| || Sbjct 55586 GGTACCAATGGCTACTCAAACGGTATCATTCCCATGCTTCGCGCGTTCGACGCCACGGCC 55527 Query 111963 CGCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCA 112019 ||||| ||| |||| | ||| ||| ||| || |||| |||| || ||||| Sbjct 55526 CGCTACGTAGACCAGGGTGGCAACAAGCGCCCGGGTGCTTTCGCCATCTACCTCGAGCCT 55467 Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079 ||||||||||| || | |||||||| || | || ||||| || | ||||||| Sbjct 55466 TGGCACGCGGACGTCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAGGTC 55407 Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 112123 || ||| || || |||| ||| |||||| |||| || ||||| Sbjct 55406 CGCGCCCGTGACCTTTTCTACGCCCTCTGGGTTCCCGACCTCTT 55363 >seq86 Length=145559 Score = 111 bits (122), Expect = 2e-19 Identities = 107/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 102238 ||||| || |||| || || || |||||||||||||||||||| || ||| ||| | Sbjct 2205 GAGCGCCTTGTCGCCTTCGCTGCGGTCGAGGGTATCTTCTTCTCTGGCTCGTTC-GCGTC 2147 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || | ||| | |||||||| ||| | ||||| || ||| |||||||||||||||||| Sbjct 2146 CATCTTCTGGTTGAAGAAGCGTGGTTTAATGCCTGGCCTCACCTTCTCCAACGAGCTTAT 2087 Query 102299 CTCTCGTGACGAGGG 102313 |||||| |||||||| Sbjct 2086 CTCTCGCGACGAGGG 2072 Score = 93.3 bits (102), Expect = 5e-14 Identities = 187/271 (69%), Gaps = 10/271 (4%) Strand=Plus/Plus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| ||| || ||||| | |||| | || | || || || || || | Sbjct 3854 CTCATCGACACGTACATCAAGGACGCTGCTCAACGCGAGTACCTGTTCGACGCGATAGAC 3913 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAG-- 102164 || | |||||| | | ||||||||||| ||||| || ||| | | |||| | Sbjct 3914 ACGATCCCATGTGTGAAGAAGAAAGCGGACTGGGCACTGCGCTGGATATCCGACAAGGAA 3973 Query 102165 TCG-CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 ||| ||||| ||||| || || |||| ||||| ||| || || ||||||||||| Sbjct 3974 TCGACGTTC----GCTGAACGCCTAGTCGCTTTTGCTGCTGTCGAAGGCATCTTCTTCTC 4029 Query 102224 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 102282 || || ||| ||| | || | |||||||||||| || || | ||||| || || | Sbjct 4030 CGGCTCGTTC-GCGTCCATCTTTTGGCTCAAGAAACGCGGCTTGATGCCCGGCCTTACTT 4088 Query 102283 TCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 |||| || || || || ||||| ||||| || Sbjct 4089 TCTCAAATGAACTCATTTCTCGCGACGAAGG 4119 >seq202 Length=72248 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 102242 |||||| | || ||||| || ||||| ||||| ||||| || || ||| || || Sbjct 46074 CGACTCGTAGCGTTTGCCGCAGTGGAGGGAATCTTTTTCTCGGGCTCGTTCGCAGCAATC 46133 Query 102243 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 102302 | |||||||| || | ||||||||||| || ||| ||||||||||| || || | | Sbjct 46134 TTCTGGCTCAAAAAAAGGGGTCTCATGCCCGGCCTCACTTTCTCCAACGAACTCATTTGT 46193 Query 102303 CGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 || ||||| ||| | ||| ||||| ||| Sbjct 46194 CGAGACGAAGGAATGCACACTGAGTTCGCG 46223 >seq117 Length=117856 Score = 86.0 bits (94), Expect = 8e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||||||||| ||||| || || ||| ||| || | ||||| ||||| ||||| Sbjct 88403 GTGGAGGGTATCTTTTTCTCGGGCTCTTTCGCCGCAATCTTCTGGCTGAAGAAACGAGGG 88462 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| || || | || ||||||||||| || | || ||||| || || ||| Sbjct 88463 CTCATGCCTGGGCTTTCGTTTTCCAACGAGCTCATATGCCGCGACGAAGGCCTACAC 88519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620733926866240