Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq379 118 7e-22 seq13 96.9 2e-15 seq220 93.3 3e-14 seq339 89.7 3e-13 >seq379 Length=45813 Score = 118 bits (130), Expect = 7e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||||||||| ||||| ||||| | || | || || ||||| || ||| Sbjct 38549 GTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCCTCAAGCTGCTTGCCG 38608 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || |||||||| |||| | ||||||||||| |||||| ||| Sbjct 38609 GCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 38668 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 ||| | |||| || || |||||| |||| || ||||| || || || | ||| Sbjct 38669 ACGTTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCGGTCAAGGTC 38728 Query 34965 TTCACAAAGATCTGCATA 34982 ||||| |||||||||||| Sbjct 38729 TTCACGAAGATCTGCATA 38746 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || |||||||| || | || |||| || ||||| || ||||| || Sbjct 38836 TCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 38895 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| |||||| || ||| Sbjct 38896 ATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 38955 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | || || || || || ||||| ||||| ||| Sbjct 38956 TCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCGGTGAGCGTCTTTACA 39015 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 39016 AAGATCTGCAT 39026 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||||||||| ||||| | || |||| || ||||| || || || || Sbjct 39396 TCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAG 39455 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| ||||| Sbjct 39456 ATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 39515 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | ||| ||||| || || ||||| ||||| || Sbjct 39516 TCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 39575 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 39576 AAAATCTGCAT 39586 >seq13 Length=301256 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | || |||| || ||||| || || ||||| Sbjct 245671 TCCTTCTGGATGTTGTAGTCGGACAGCGTCCGACCATCCTCAAGCTGCTTCCCAGCAAAG 245730 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 245731 ATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 245790 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| || ||||| || || ||||||||||| || Sbjct 245791 TCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTTAACG 245850 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 245851 AAGATCTGCAT 245861 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || ||| | || | || || ||||| || ||||| || Sbjct 245107 TCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAG 245166 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || |||||||| |||| | |||||||| || |||||| |||||| Sbjct 245167 ATCAAGCGCTGCTGGTCCGGCGGGATACCCTCCTTATCCTGGATCTTCGCCTTGACGTTG 245226 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || |||| || ||||| || || || | ||||| || Sbjct 245227 TCGATGGTATCAGAAGACTCGACCTCGAGCGTGATGGTCTTGCCAGTCAACGTCTTGACG 245286 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 245287 AAGATCTGCATA 245298 Score = 84.2 bits (92), Expect = 1e-11 Identities = 137/195 (70%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || |||||| | || | || || ||||| || || || || Sbjct 245390 TCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 245449 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || || || Sbjct 245450 ATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 245507 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| ||| | ||| || |||| || ||||| || || ||||| ||||| Sbjct 245508 --TGTCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGCGTCTT 245565 Query 34967 CACAAAGATCTGCAT 34981 ||| || |||||||| Sbjct 245566 CACGAATATCTGCAT 245580 >seq220 Length=67240 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/214 (71%), Gaps = 9/214 (4%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| |||| ||| || ||||| ||||| || || || || | || | || || Sbjct 23352 ACCAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGCGTACGGCCGTCCTC 23411 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 23412 GAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTG 23471 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| ||||| || | ||||| || | || |||||| |||| ||| |||| Sbjct 23472 GATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGG 23527 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || || |||||||| ||||||||||| Sbjct 23528 TCTTGCCGGTAAGGGTCTTCACGAAGATCTGCAT 23561 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| || ||||| || | || |||| || ||||| || ||| Sbjct 22511 GTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCATCCTCGAGCTGCTTGCCG 22570 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || | || |||||||| |||| | ||||||||||| |||||| || Sbjct 22571 GCGAAGATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC 22630 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 ||| | |||| || | ||| || |||| || ||||| || || || | ||| Sbjct 22631 ACGTTGTCGATCGTGTCGGACGACTCCACCTCGAGCGTGATGGTCTTGCCGGTCAACGTC 22690 Query 34965 TTCACAAAGATCTGCAT 34981 || || ||||||||||| Sbjct 22691 TTGACGAAGATCTGCAT 22707 >seq339 Length=34629 Score = 89.7 bits (98), Expect = 3e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||| ||||| ||| | || | || || ||||| Sbjct 18847 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGCTG 18788 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || || |||||||| |||| | ||||||||||| ||||| Sbjct 18787 CTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTT 18728 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 ||||| | |||| || || ||| || |||| ||| |||||||| ||||| Sbjct 18727 GGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCCGT 18668 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || || |||||||| Sbjct 18667 AAGGGTCTTGACGAAAATCTGCAT 18644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324629279532576