Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq86 107 2e-18 seq247 93.3 5e-14 >seq86 Length=145559 Score = 107 bits (118), Expect = 2e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 || || || ||| | || | || ||||| ||||||||||| | ||||| || ||| Sbjct 2292 TTCGATGCTATCGAGACCATCCCCTGTATCAAGAAGAAGGCGGACTGGGCCCTGCGCTGG 2233 Query 65050 TTTG-ACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGG 65108 | | || | | ||| | |||| |||||||||| | || || || || ||||| Sbjct 2232 ATCACAGACGAGGAATCGA-CATTCGGCGAGCGCCTTGTCGCCTTCGCTGCGGTCGAGGG 2174 Query 65109 TATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGC 65167 |||||||||||| || || ||| ||| | || | |||||||||||||| ||| | |||| Sbjct 2173 TATCTTCTTCTCTGGCTCGTTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTTTAATGC 2115 Query 65168 CAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | ||||| |||||| || || ||||| || || || |||||| | ||| Sbjct 2114 CTGGCCTCACCTTCTCCAACGAGCTTATCTCTCGCGACGAGGGTATGCAC 2065 Score = 93.3 bits (102), Expect = 5e-14 Identities = 145/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 65011 CCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTC 65069 |||||| | ||||||| ||| | |||||| || ||| | | |||| | ||| | Sbjct 3920 CCATGTGTGAAGAAGAAAGCGGACTGGGCACTGCGCTGGATATCCGACAAGGAATCGA-C 3978 Query 65070 CTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATT 65129 ||||| || ||||| | || ||||| ||| || || |||||||||||||| || || Sbjct 3979 GTTCGCTGAACGCCTAGTCGCTTTTGCTGCTGTCGAAGGCATCTTCTTCTCCGGCTCGTT 4038 Query 65130 CTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 | ||| | || | |||| | ||||| || || | ||||| ||||| |||||||||| Sbjct 4039 C-GCGTCCATCTTTTGGCTCAAGAAACGCGGCTTGATGCCCGGCCTTACTTTCTCAAATG 4097 Query 65189 AACTTATTTCCCGAGATGAGGG 65210 |||| ||||| || || || || Sbjct 4098 AACTCATTTCTCGCGACGAAGG 4119 >seq247 Length=55536 Score = 93.3 bits (102), Expect = 5e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATT 65139 || ||| ||||||| || ||||||||||||||||||||||| || ||||| | | || Sbjct 43759 CGACTTGTTGCGTTCGCTTGTGTGGAGGGTATCTTCTTCTCGGGCGCATTCGCCTCGATA 43818 Query 65140 TATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCC 65199 | ||| | ||||| | |||||| | || || || ||| || || ||||| || ||| Sbjct 43819 TTCTGGCTCAAGAAAAGAGGTCTCCTTCCCGGACTGACCTTTTCGAACGAACTCATATCC 43878 Query 65200 CGAGATGAGGG 65210 || |||||||| Sbjct 43879 CGCGATGAGGG 43889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596561456824960