Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq378 89.7 8e-13 >seq378 Length=27749 Score = 89.7 bits (98), Expect = 8e-13 Identities = 355/555 (64%), Gaps = 15/555 (3%) Strand=Plus/Minus Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217 || ||||| |||||||| | || ||||| | | |||| | || || ||| || | Sbjct 7371 CATGCAAATTCAGTGTGCATGCCCTCATCCCGGCATATGAGCTCATTCGAAAATGTGAGG 7312 Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277 |||||||||| || || || || ||||| ||||| | |||||| | ||||||||| Sbjct 7311 CCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCGAAGGATCCTGAAAAGAAT 7252 Query 18278 ATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAG- 18336 |||||||| || |||||| || | ||||| | || || | | | | | |||| Sbjct 7251 ATACCCTCCACTGCCGCGAAAGCCACTAATCGCACGGCGAATGAGGACCTCTCG-TCAGC 7193 Query 18337 TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATT 18396 ||||| ||| | ||||| ||||| | | ||| || | | ||| Sbjct 7192 GATCCACTTTAGCGCCCACTCTCCCTTCTCCGAAACGGTCGGCATGGTGGTCAGAGC--- 7136 Query 18397 AAACAAATCATCTTTTTCTTT----GGAATCTTTTATATAAGTGTCGATTAACAAAGAAT 18452 ||||| | | | | || | ||||| || || || | ||| || | || | Sbjct 7135 -TGCAAATAGTTTGGTGCGTTCGCGTGGATCTTGGATGTACGTCTGGATCAAGAGGGAGT 7077 Query 18453 ACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGG 18512 || | || ||||| | | | ||||| ||||| |||| ||| || | | || || | Sbjct 7076 ACGTCTCTGAATGAACGTTCTCCATCATGATCTGGAAACCATAGAAACACCGTGCTTCCG 7017 Query 18513 GATATTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCA 18571 | ||| | ||| || | |||| ||||| | ||||| || || || ||||| | Sbjct 7016 CAACTTGCACCTCAGCGCT-GAATCGCTCTACGAGGTTCTCGTTCACGATTCCGTCGGAT 6958 Query 18572 GATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGAT---TG 18628 | ||||| || || | || | | ||||| | |||| | |||| | || Sbjct 6957 GCGGCGAAGAAGGCGAGGACGTGTGAGATGAAGCGCCTTTCTCCGTGGGTGAGTTTCGTG 6898 Query 18629 TTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCG 18688 | ||| ||| || |||||| || ||||| | |||||| || ||||| || |||| || Sbjct 6897 TGCCAGTCAAGTAGATCTTTGGACAGATCTATTTCTTCGGAAGTCCAGAACGATGCTTGC 6838 Query 18689 GCCTGTTTGTACATT 18703 |||||||| |||||| Sbjct 6837 GCCTGTTTATACATT 6823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731862009947200