Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq13 125 1e-23 seq379 109 1e-18 seq220 89.7 1e-12 >seq13 Length=301256 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | ||| || || || | |||||| || || || ||||| || || ||||| || Sbjct 244843 CCACCACGCAAGCGGAGGACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGAG 244902 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | ||| || || || || || || || ||||| || | || || || || || Sbjct 244903 AGAGTGCGACCATCCTCAAGCTGCTTCCCCGCGAAGATCAGACGCTGCTGGTCGGGCGGG 244962 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| ||||| || |||||||| || || || || ||||| || || | || || Sbjct 244963 ATTCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCAATTGTGTCCGATGACTCGACC 245022 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||||||||| ||||| ||||| || || || ||||| Sbjct 245023 TCCAAGGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 245069 Score = 113 bits (124), Expect = 9e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || | ||| || || || || ||||| || || || || || Sbjct 245071 CCGCCGCGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 245130 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | |||||| || || || || || || ||||| | | || || || || || Sbjct 245131 AGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 245190 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || |||||||| || ||||| || || || || || || |||||| || || || Sbjct 245191 ATACCCTCCTTATCCTGGATCTTCGCCTTGACGTTGTCGATGGTATCAGAAGACTCGACC 245250 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| ||||||||||| || || |||||||| Sbjct 245251 TCGAGCGTGATGGTCTTGCCAGTCAACGTCTTGACGAAGATCTGCAT 245297 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || ||||| || ||||| || || ||||| || || | | ||||| || || || Sbjct 245378 TGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTCGAGCTGC 245437 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||| ||||| || | || || || || || || || ||||| || || ||||| Sbjct 245438 TTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTC 245497 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || ||||| || || || ||| | || || || | || || |||||||| || Sbjct 245498 GCCTTCACATTGTCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTG 245557 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | |||||| || ||||||||||| Sbjct 245558 AGCGTCTTCACGAATATCTGCAT 245580 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| || ||||| || ||||| || || || || || || | | ||| || || || || Sbjct 245658 GTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTCCGACCATCCTCAAGCTG 245717 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || ||||||||||| || | || || || ||||| || || ||||| || || ||||| Sbjct 245718 CTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTT 245777 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || || || || || | || || || | ||| || |||||||| || Sbjct 245778 GGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCAGT 245837 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 245838 GAGAGTCTTAACGAAGATCTGCAT 245861 >seq379 Length=45813 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 ||||| ||||| || ||||| ||||| || || || || | | || || || || || Sbjct 38824 TGCAGCGTAGACTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGCTGC 38883 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || || ||||| || | || || || || || || || ||||| || || ||||| Sbjct 38884 TTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTC 38943 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || || || || || || || | || || ||||| || ||||||||||| || Sbjct 38944 GCCTTCACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCGGTG 39003 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | |||||||||||| |||||||| Sbjct 39004 AGCGTCTTTACAAAGATCTGCAT 39026 >seq220 Length=67240 Score = 89.7 bits (98), Expect = 1e-12 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || | |||||| || || ||||| || || ||||| || Sbjct 22481 CCACCACGCAGACGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAG 22540 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || || || || || || || || ||||| | | || || || || || Sbjct 22541 AGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 22600 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || || ||||| || || || || || ||||| || | || || Sbjct 22601 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCGGACGACTCCACC 22660 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| ||||||||||| || || |||||||| Sbjct 22661 TCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 22707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981813463010188