Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq220 116 2e-21 seq379 89.7 3e-13 seq13 86.0 4e-12 >seq220 Length=67240 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | ||| | || || |||||||| || || ||||||||||| ||| Sbjct 22481 CCACCACGCAGACGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAG 22540 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | || || ||||| || ||||| |||||||| || |||| Sbjct 22541 AGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 22600 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || ||| ||| || | ||| | |||||| || ||||| Sbjct 22601 ATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATCGTGTCGGACGACTCCAC 22659 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | |||||| || || || || ||||| || || ||||||||||| Sbjct 22660 CTCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 22707 >seq379 Length=45813 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || || ||||| || ||||| ||||| | || || | || || ||||| || Sbjct 38835 CTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAA 38894 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| |||||||| || |||| | || || ||||| || ||| |||| | | Sbjct 38895 GATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 38953 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | |||||| || || || || | ||||||||| || || || | ||| |||| Sbjct 38954 TGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCGGTGAGCGTCTTTA 39013 Query 33737 CAAAGATCTGCAT 33749 ||||||||||||| Sbjct 39014 CAAAGATCTGCAT 39026 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || |||||||| || || |||||||| || || || ||||| |||| || | || Sbjct 38543 TGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCCTCAAGCTGC 38602 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || |||| |||||||| || |||| | || || ||||| || ||| Sbjct 38603 TTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTC 38662 Query 33667 TGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | | | |||| ||||| || || || || | |||||| || || || || Sbjct 38663 GCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCGGT 38721 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 || || || || |||||||||||| Sbjct 38722 CAAGGTCTTCACGAAGATCTGCATA 38746 >seq13 Length=301256 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| |||||||| || || |||| || | || || ||||| || Sbjct 245106 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAA 245165 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||||| |||||||| || |||| | ||| || || || || ||| || | | | Sbjct 245166 GATCAAGCGCTGCTGGTCCGGCGGGATACCCTCCTTATCCTGGATCTTCGCCTTGA-CGT 245224 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||| || || || || || | |||||| || || || || ||||| || | Sbjct 245225 TGTCGATGGTATCAGAAGACTCGACCTCGAGCGTGATGGTCTTGCCAGTCAACGTCTTGA 245284 Query 33737 CAAAGATCTGCATA 33750 | |||||||||||| Sbjct 245285 CGAAGATCTGCATA 245298 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || ||||||||||| ||||| ||||| | || || | || || || || || Sbjct 244878 CTCCTTCTGAATGTTGTAATCCGAGAGAGTGCGACCATCCTCAAGCTGCTTCCCCGCGAA 244937 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| ||||||||| || |||| | || || ||||| ||| ||| ||| || | Sbjct 244938 GATCAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCCTGAATCTTCGCCTTC-ACGT 244996 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||||| ||| || || || | |||||||| || || || || || || | Sbjct 244997 TGTCAATTGTGTCCGATGACTCGACCTCCAAGGTGATCGTCTTGCCGGTCAAGGTCTTGA 245056 Query 33737 CAAAGATCTGCAT 33749 | ||||| ||||| Sbjct 245057 CGAAGATTTGCAT 245069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328699625360640