Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq13 91.5 3e-13 seq379 87.8 4e-12 >seq13 Length=301256 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| || |||||||| || || || ||||| | || || || |||||| Sbjct 245577 CAGATATTCGTGAAGACGCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCTGAC 245518 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| |||||| || Sbjct 245517 ACTATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 245458 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| | || || || | || | ||||||||||| || Sbjct 245457 CGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCCGATTACAACATC 245398 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| |||||||| || || |||| Sbjct 245397 CAGAAGGAGTCTACCCTACATCTTG 245373 >seq379 Length=45813 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || |||||||| || || |||||||| ||||| || || || ||| Sbjct 39023 CAGATCTTTGTAAAGACGCTCACCGGCAAGACGATCACGTTGGAGGTCGAGTCCTCGGAC 38964 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || ||| ||| || Sbjct 38963 ACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAG 38904 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| | || ||||| | || | | || ||||| || Sbjct 38903 CGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTCTCGGACTACAATATC 38844 Query 206353 CAGAAAGAGTCTACTCTTCACCT 206375 ||||| |||||||| || || || Sbjct 38843 CAGAAGGAGTCTACGCTGCATCT 38821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181804264849732