Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq86 134 2e-26 seq378 118 1e-21 seq202 95.1 2e-14 >seq86 Length=145559 Score = 134 bits (148), Expect = 2e-26 Identities = 249/365 (68%), Gaps = 3/365 (1%) Strand=Plus/Minus Query 39607 AAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGA 39666 ||||| ||| ||||||||||| ||| | ||| || || | | ||| | ||| || || Sbjct 4150 AAACAGTAAACAGGCGAAGTCGGTATGCATGCCTTCGTCGCGAGAAATGAGTTCATTTGA 4091 Query 39667 AAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCC 39726 || || || || ||||| | || || || ||||||||||| |||| || || || || Sbjct 4090 GAAAGTAAGGCCGGGCATCAAGCCGCGTTTCTTGAGCCAAAAGATGGACGCGAACGAGCC 4031 Query 39727 AGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC 39786 || |||||||||||||| || || ||||| || || || | || || | | | || Sbjct 4030 GGAGAAGAAGATGCCTTCGACAGCAGCAAAAGCGACTAGGCGTTCAGCGAACGTCGATTC 3971 Query 39787 ATTAT---GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTC 39843 || | |||||| | ||||||| || ||||||||||| ||||| || || || || Sbjct 3970 CTTGTCGGATATCCAGCGCAGTGCCCAGTCCGCTTTCTTCTTCACACATGGGATCGTGTC 3911 Query 39844 TATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAG 39903 ||| || | || || || | || | || || || | || || || || | ||| Sbjct 3910 TATCGCGTCGAACAGGTACTCGCGTTGAGCAGCGTCCTTGATGTACGTGTCGATGAGCAG 3851 Query 39904 ACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGC 39963 ||| | || ||||| || || || ||| ||||| || ||||| ||| | | || Sbjct 3850 GGAATAAGTCTCCGAATGTATATTCTCCATCATAATCTGGAAGCCGTAGAAAGAGCGCGC 3791 Query 39964 TTCAG 39968 ||||| Sbjct 3790 TTCAG 3786 >seq378 Length=27749 Score = 118 bits (130), Expect = 1e-21 Identities = 364/560 (65%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || || ||| || | ||||||||| | | || | || || ||||||||||| Sbjct 7372 GCATGCAAATTCAGTGTGCATGCCCTCATCCCGGCATATGAGCTCATTCGAAAATGTGAG 7313 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || |||||||| || | ||| |||||||| ||||| || || || ||||| |||||||| Sbjct 7312 GCCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCGAAGGATCCTGAAAAGAA 7253 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TATCATTATG 39792 || || || ||||| || || || || | || | | || | | | || | | Sbjct 7252 TATACCCTCCACTGCCGCGAAAGCCACTAATCGCACGGCGAATGAGGACCTCTCGTCAGC 7193 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 |||||||| | ||||| || | |||| | || ||||| || | ||| Sbjct 7192 GATCCACTTTAGCGCCCACTCTCCCTTCTCCGAAACGGTCGGCATGGTGGTCAGAGCTGC 7133 Query 39853 AAAGAGATAATGTT--TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATAC 39910 ||| || | || | ||| ||||| | || || | || || || ||| Sbjct 7132 AAATAGTT--TGGTGCGTTCGCGTGGATCTTGGATGTACGTCTGGATCAAGAGGGAGTAC 7075 Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970 | |||||||| | ||| || ||| ||||| || || || ||||| | |||||| | | Sbjct 7074 GTCTCTGAATGAACGTTCTCCATCATGATCTGGAAACCATAGAAACACCGTGCTTCCGCA 7015 Query 39971 ATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCG 40030 | ||| ||||| | | |||| || | | || || ||||| ||||| || ||| Sbjct 7014 ACTTGCACCTCAGCGCTGAATCGCTCTACGAGGTTCTCGTTCACGATTCCGTCGGATGCG 6955 Query 40031 GCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATT---TATTC 40087 || || || || | || ||| || || |||| || | || | || | | | Sbjct 6954 GCGAAGAAGGCGAGGACGTGTGAGATGAAGCGCCTTTCTCCGTGGGTGAGTTTCGTGTGC 6895 Query 40088 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCC 40147 |||||| | |||||| || | ||||| |||||| | ||||| ||||| || | ||| Sbjct 6894 CAGTCAAGTAGATCTTTGGACAGATCTATTTCTTCGGAAGTCCAGAACGATGCTTGCGCC 6835 Query 40148 TTTTTGTACATGTTCCATAT 40167 | ||| ||||| ||||||| Sbjct 6834 TGTTTATACATTCTCCATAT 6815 >seq202 Length=72248 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| ||||| ||| || | || || |||| || ||| | |||||| || || ||||| Sbjct 46226 GCACGCGAACTCAGTGTGCATTCCTTCGTCTCGACAAATGAGTTCGTTGGAGAAAGTGAG 46167 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||| | ||||||||||| || || || || || || || || || || Sbjct 46166 GCCGGGCATGAGACCCCTTTTTTTGAGCCAGAAGATTGCTGCGAACGAGCCCGAGAAAAA 46107 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTC 39767 ||| || || ||||| ||||| || || |||| Sbjct 46106 GATTCCCTCCACTGCGGCAAACGCTACGAGTC 46075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686899423694880