Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq86 95.1 2e-14 seq247 93.3 5e-14 >seq86 Length=145559 Score = 95.1 bits (104), Expect = 2e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| | |||||| || || || ||||| || || |||||| || || ||||| | ||| Sbjct 2065 GTGCATACCCTCGTCGCGAGAGATAAGCTCGTTGGAGAAGGTGAGGCCAGGCATTAAACC 2124 Query 122730 CCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 122788 |||||||||||||| | || | ||| ||| || || ||||||||||||||||| || Sbjct 2125 ACGCTTCTTCAACCAGAAGATGGACGC-GAACGAGCCAGAGAAGAAGATACCCTCGACCG 2183 Query 122789 ACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATT 122847 || || || | |||||| ||| |||| | ||| | | | | | ||| || Sbjct 2184 CAGCGAAGGCGACAAGGCGCTCGCCGAATG-TCGATTCCTCGTCTGTGATCCAGCGCAGG 2242 Query 122848 GCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 122897 ||||| | ||||||||||| ||||| || | || | ||| || || || Sbjct 2243 GCCCAGTCCGCCTTCTTCTTGATACAGGGGATGGTCTCGATAGCATCGAA 2292 Score = 89.7 bits (98), Expect = 6e-13 Identities = 144/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 || || || || ||||| |||||||||||||| || || ||||| | || || ||| Sbjct 4119 CCTTCGTCGCGAGAAATGAGTTCATTTGAGAAAGTAAGGCCGGGCATCAAGCCGCGTTTC 4060 Query 122737 TTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 || | |||| | || | ||| ||| || |||||||||||||| || || ||| ||||| Sbjct 4059 TTGAGCCAAAAGATGGACGC-GAACGAGCCGGAGAAGAAGATGCCTTCGACAGCAGCAAA 4001 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTGCCCATT 122854 || | |||||||| ||||| | ||| | ||| | | ||| || |||||| | Sbjct 4000 AGCGACTAGGCGTTCAGCGAACG-TCGATTCCTTGTCGGATATCCAGCGCAGTGCCCAGT 3942 Query 122855 TCGCCTTCTTCTCAATACATGG 122876 ||| ||||||| | |||||| Sbjct 3941 CCGCTTTCTTCTTCACACATGG 3920 >seq247 Length=55536 Score = 93.3 bits (102), Expect = 5e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 |||||||| ||||| || ||||| || || ||| || || || | |||||| | ||| Sbjct 43889 CCCTCATCGCGGGATATGAGTTCGTTCGAAAAGGTCAGTCCGGGAAGGAGACCTCTTTTC 43830 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 || | ||| | || | | ||||| || ||||||||||||||||||||||| || ||| Sbjct 43829 TTGAGCCAGAATATCGAGGCGAATGCGCCCGAGAAGAAGATACCCTCCACACAAGCGAAC 43770 Query 122797 GCAAAAAGGCG 122807 |||| ||| || Sbjct 43769 GCAACAAGTCG 43759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628023427363200