Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq86 118 1e-21 seq247 107 2e-18 seq97 84.2 3e-11 >seq86 Length=145559 Score = 118 bits (130), Expect = 1e-21 Identities = 342/513 (67%), Gaps = 15/513 (3%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| | ||||||||| || ||||| || || || |||||| || || ||||| | ||| Sbjct 2065 GTGCATACCCTCGTCGCGAGAGATAAGCTCGTTGGAGAAGGTGAGGCCAGGCATTAAACC 2124 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 ||||||||||||||||| || | || ||||||||||||||||| ||||| || Sbjct 2125 ACGCTTCTTCAACCAGAAGATGGACGCGAACGAGCCAGAGAAGAAGATACCCTCGACCGC 2184 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCG 130205 ||||| || | || ||||| | || | || | | || | | ||| || | Sbjct 2185 AGCGAAGGCGACAAGGCGCTCGCCGAATG-TCGATTCCTCGTCTGTGATCCAGCGCAGGG 2243 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 130265 |||| | |||||| |||| |||||| |||| ||||| ||| || || ||||| | | Sbjct 2244 CCCAGTCCGCCTTCTTCTTGATACAGGGGATGGTCTCGATAGCATCGAAGAGGTAGT--C 2301 Query 130266 TTTCTGAT--GGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGAC 130323 ||| | || || ||||||||| | || ||||| || || || ||| |||| Sbjct 2302 GCGCTGGTTGGGGTCCTTGATGTACGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGAT 2361 Query 130324 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 130382 | | ||| || ||| | |||||||| | | || ||| ||| ||||| | Sbjct 2362 GTTCTCCATCAT-AATCTGGAAGCCGTAGAAACACCTTGCCTCGGCGGCCTGGACCTCGT 2420 Query 130383 CTGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCC 130441 || |||| | | | | |||||| ||||| || || || |||| || || || Sbjct 2421 -TGGAAAAGCGCTCGAGAAGATTCTCGTTGACAATACCGTCAGAGGCAGCGAAGAAGGCG 2479 Query 130442 AGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT-CAAG 130497 || | || ||||| | | || || || |||| |||| | |||||||| |||| Sbjct 2480 AGAACATGAGAGATGAAGTGGCGCTCGTTGTCATTCAGGCGGGTGTGCCAGTCGTGCAAG 2539 Query 130498 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 || || || ||||| | |||||| || ||||| Sbjct 2540 -TCTTTGGACAGATCCATCTCCTCAGCGGTCCA 2571 >seq247 Length=55536 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||| || ||||| |||||||| ||||| ||| ||| || || | |||||| | ||| Sbjct 43889 CCCTCATCGCGGGATATGAGTTCGTTCGAAAAGGTCAGTCCGGGAAGGAGACCTCTTTTC 43830 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| |||| |||| ||| ||||||||||| ||||||||||| |||||| Sbjct 43829 TTGAGCCAGAATATCGAGGCGAATGCGCCCGAGAAGAAGATACCCTCCACACAAGCGAAC 43770 Query 130154 GCAA 130157 |||| Sbjct 43769 GCAA 43766 >seq97 Length=131314 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 || ||||| |||||| |||||||| || ||||| || || ||| | |||||| Sbjct 124542 GCGAACTCGGTGTGGAGGCCCTCGTCTCGAGAGATCCTCTCGTTGGAGTACGTGAGACCT 124601 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 |||| |||||| |||||||| | ||| || || | || || ||||||||||| || Sbjct 124602 GGCAGGAGACCACGCTTCTTGAGCCAAAATATTGACGCGAACGATCCAGAGAAGAAAATT 124661 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 || ||| |||| ||||| || | || | | |||||||| Sbjct 124662 CCTTCCGCACAAGCGAAAGCGACTAGTCTCATGGCAAAGGA 124702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618426758359520