Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq97 123 3e-23 seq86 111 2e-19 seq209 102 1e-16 seq202 86.0 7e-12 seq117 86.0 7e-12 >seq97 Length=131314 Score = 123 bits (136), Expect = 3e-23 Identities = 126/162 (78%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 |||||||| | |||| |||| || || |||| || || || ||||||||||| || Sbjct 124702 TCCTTTGCCATGAGACTAGTCGCTTTCGCTTGTGCGGAAGGAATTTTCTTCTCTGGATCG 124643 Query 94855 TTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913 ||| ||| | || | ||||||||||||||| |||||| ||||||||||| | |||||| Sbjct 124642 TTC-GCGTCAATATTTTGGCTCAAGAAGCGTGGTCTCCTGCCAGGTCTCACGTACTCCAA 124584 Query 94914 CGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||| |||||||| |||||||| |||||| ||||| || Sbjct 124583 CGAGAGGATCTCTCGAGACGAGGGCCTCCACACCGAGTTCGC 124542 >seq86 Length=145559 Score = 111 bits (122), Expect = 2e-19 Identities = 107/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 94862 ||||| || |||| || || || |||||||||||||||||||| || ||| ||| | Sbjct 2205 GAGCGCCTTGTCGCCTTCGCTGCGGTCGAGGGTATCTTCTTCTCTGGCTCGTTC-GCGTC 2147 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || | ||| | |||||||| ||| | ||||| || ||| |||||||||||||||||| Sbjct 2146 CATCTTCTGGTTGAAGAAGCGTGGTTTAATGCCTGGCCTCACCTTCTCCAACGAGCTTAT 2087 Query 94923 CTCTCGTGACGAGGG 94937 |||||| |||||||| Sbjct 2086 CTCTCGCGACGAGGG 2072 Score = 87.8 bits (96), Expect = 2e-12 Identities = 186/271 (69%), Gaps = 10/271 (4%) Strand=Plus/Plus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 94731 ||||| |||| ||| || ||||| | |||| | || | || || || || || | Sbjct 3854 CTCATCGACACGTACATCAAGGACGCTGCTCAACGCGAGTACCTGTTCGACGCGATAGAC 3913 Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAG-- 94788 || | || ||| | | ||||||||||| ||||| || ||| | | |||| | Sbjct 3914 ACGATCCCATGTGTGAAGAAGAAAGCGGACTGGGCACTGCGCTGGATATCCGACAAGGAA 3973 Query 94789 TCG-CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 94847 ||| ||||| ||||| || || |||| ||||| ||| || || ||||||||||| Sbjct 3974 TCGACGTTC----GCTGAACGCCTAGTCGCTTTTGCTGCTGTCGAAGGCATCTTCTTCTC 4029 Query 94848 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 94906 || || ||| ||| | || | |||||||||||| || || | ||||| || || | Sbjct 4030 CGGCTCGTTC-GCGTCCATCTTTTGGCTCAAGAAACGCGGCTTGATGCCCGGCCTTACTT 4088 Query 94907 TCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 |||| || || || || ||||| ||||| || Sbjct 4089 TCTCAAATGAACTCATTTCTCGCGACGAAGG 4119 >seq209 Length=70723 Score = 102 bits (112), Expect = 1e-16 Identities = 159/227 (70%), Gaps = 9/227 (4%) Strand=Plus/Minus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || || ||||| | ||| | ||||| ||||| |||||||||| || ||||||| || Sbjct 55586 GGTACCAATGGCTACTCAAACGGTATCATTCCCATGCTTCGCGCGTTCGACGCCACGGCC 55527 Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626 ||||| ||| | || | ||| ||| | ||| || |||| |||| || ||| Sbjct 55526 CGCTACGTAGACCAGGGTGGCAACAAGCGCCC---GGGTGCTTTCGCCATCTACCTCGAG 55470 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686 || ||||||||||| || | |||||||| || | || ||||| || | |||||| Sbjct 55469 CCTTGGCACGCGGACGTCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAG 55410 Query 104687 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 104733 | || ||| || || |||| ||| |||||| |||| || ||||| Sbjct 55409 GTCCGCGCCCGTGACCTTTTCTACGCCCTCTGGGTTCCCGACCTCTT 55363 >seq202 Length=72248 Score = 86.0 bits (94), Expect = 7e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 94866 |||||| | || ||||| || ||||| ||||| ||||| || || ||| || || Sbjct 46074 CGACTCGTAGCGTTTGCCGCAGTGGAGGGAATCTTTTTCTCGGGCTCGTTCGCAGCAATC 46133 Query 94867 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 94926 | |||||||| || | ||||||||||| || ||| ||||||||||| || || | | Sbjct 46134 TTCTGGCTCAAAAAAAGGGGTCTCATGCCCGGCCTCACTTTCTCCAACGAACTCATTTGT 46193 Query 94927 CGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 || ||||| ||| | ||| ||||| ||| Sbjct 46194 CGAGACGAAGGAATGCACACTGAGTTCGCG 46223 >seq117 Length=117856 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||||||||| ||||| || || ||| ||| || | ||||| ||||| ||||| Sbjct 88403 GTGGAGGGTATCTTTTTCTCGGGCTCTTTCGCCGCAATCTTCTGGCTGAAGAAACGAGGG 88462 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| || || | || ||||||||||| || | || ||||| || || ||| Sbjct 88463 CTCATGCCTGGGCTTTCGTTTTCCAACGAGCTCATATGCCGCGACGAAGGCCTACAC 88519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583252838490080