Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq379 122 5e-23 seq220 111 1e-19 seq13 102 5e-17 >seq379 Length=45813 Score = 122 bits (134), Expect = 5e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||||||||||| |||||||| || || ||||| || ||| |||| ||||| || Sbjct 38543 TGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCCTCAAGCTGC 38602 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | ||||| ||||||||||| | ||||||||||| |||| || Sbjct 38603 TTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATC-TT 38661 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | ||| ||||| | ||| || || | || || || || ||||| Sbjct 38662 CGCCTTGACGTTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCGGT 38721 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || || ||||| || |||||||| Sbjct 38722 CAAGGTCTTCACGAAGATCTGCAT 38745 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || || || || || || || || || | || ||||| || || ||||| || Sbjct 38835 CTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAA 38894 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | ||||| ||||| ||||| | ||||||||||| |||| || | || ||| Sbjct 38895 GATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATC-TTCGCCTTCACGT 38953 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || ||||| | ||| || |||| || ||||| || ||||| | ||| || | Sbjct 38954 TGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCGGTGAGCGTCTTTA 39013 Query 34694 CAAAAATCTGCATG 34707 |||| ||||||||| Sbjct 39014 CAAAGATCTGCATG 39027 >seq220 Length=67240 Score = 111 bits (122), Expect = 1e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | || || ||||||||||| || ||||| ||||| || || || ||| Sbjct 22490 AGACGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGC 22549 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || ||||| || || || ||||| ||||||||||| | |||||| Sbjct 22550 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCC 22609 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | || ||||| |||||| || | || Sbjct 22610 TTGTCCTGGATC-TTCGCCTTCACGTTGTCGATCGTGTCGGACGACTCCACCTCGAGCGT 22668 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| ||||| || || || ||||||||| Sbjct 22669 GATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 22708 >seq13 Length=301256 Score = 102 bits (112), Expect = 5e-17 Identities = 143/196 (73%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| |||||||| ||||| || || || || | || ||||| || || || || || Sbjct 244878 CTCCTTCTGAATGTTGTAATCCGAGAGAGTGCGACCATCCTCAAGCTGCTTCCCCGCGAA 244937 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | |||||| ||||| ||||| | |||||||||||| ||| || | || ||| Sbjct 244938 GATCAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTC-CTGAATCTTCGCCTTCACGT 244996 Query 34635 T-AAAATTGTGTCTTCGCT--CTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTT 34691 | ||||||||| || | ||| || |||| ||| ||||| || ||||| || || || Sbjct 244997 TGTCAATTGTGTC--CGATGACTCGACCTCCAAGGTGATCGTCTTGCCGGTCAAGGTCTT 245054 Query 34692 CACAAAAATCTGCATG 34707 || || || |||||| Sbjct 245055 GACGAAGATTTGCATG 245070 Score = 84.2 bits (92), Expect = 1e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | || | || || || |||||| |||||||| || || || Sbjct 245070 GCCGCCGCGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGA 245129 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| ||||| || || ||||| || || || ||||| ||||||||||| Sbjct 245130 GAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGG 245189 Query 34599 CACTCCCTCCTTGTCTGTGATCTT 34622 | |||||||| || |||||| Sbjct 245190 GATACCCTCCTTATCCTGGATCTT 245213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725411342436