Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq13 116 3e-21 seq220 107 2e-18 seq379 98.7 9e-16 >seq13 Length=301256 Score = 116 bits (128), Expect = 3e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||| || || || || ||||||||| | || || || || || || |||| Sbjct 245581 CATGCAGATATTCGTGAAGACGCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTC 245522 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || || || || || ||||| || ||||| || || || || Sbjct 245521 TGACACTATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 245462 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||| ||||| || | || ||| | ||| ||||||||||||| Sbjct 245461 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCCGATTACAA 245402 Query 27167 CATTCAAAAGGAGTCGACCTTACAT-TTGGT 27196 ||| || |||||||| ||| ||||| ||||| Sbjct 245401 CATCCAGAAGGAGTCTACCCTACATCTTGGT 245371 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || |||||| || || || || || ||||||||||| | || || | || || || | Sbjct 245073 CGGCATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACCTTGGAGGTCGAGTC 245014 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || ||| | ||||| | || || || ||||| ||||| || || || || ||||| Sbjct 245013 ATCGGACACAATTGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGAATCCCGCCCGA 244954 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || |||||| | || | ||| || || || | || || || || | || ||||| Sbjct 244953 CCAGCAGCGTCTGATCTTCGCGGGGAAGCAGCTTGAGGATGGTCGCACTCTCTCGGATTA 244894 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||||||| |||||||||||| | || | || | || ||||| |||||| Sbjct 244893 CAACATTCAGAAGGAGTCGACCCTGCACCTTGTCCTCCGCTTGCGTGGTGGC 244842 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 |||||||||||| || || || ||||| || |||||| | || ||||| || || || | Sbjct 245865 CGCCATGCAGATCTTCGTTAAGACTCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTC 245806 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 |||||| | || || | ||||| || || || ||||| || ||||| || ||||| Sbjct 245805 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGA 245746 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || ||||| | || | || || || || | || || || ||| | ||||| || Sbjct 245745 CCAGCAGCGCCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGTCGGACGCTGTCCGACTA 245686 Query 27164 CAACATTCAAAAGGAGTCGACC 27185 |||||| || |||||||| ||| Sbjct 245685 CAACATCCAGAAGGAGTCTACC 245664 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| |||||| | || || || || || || | || Sbjct 245297 ATGCAGATCTTCGTCAAGACGTTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCTTCT 245238 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || || || || || || || || || || || Sbjct 245237 GATACCATCGACAACGTCAAGGCGAAGATCCAGGATAAGGAGGGTATCCCGCCGGACCAG 245178 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||||||| || | || ||| || ||| | ||||| |||||| Sbjct 245177 CAGCGCTTGATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGTACCCTCTCCGACTACAAC 245118 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || | || | ||| |||| || ||||| Sbjct 245117 ATTCAGAAGGAGTCGACGCTTCACCTCGTCCTCCGTCTGCGCGGCGGCAT 245068 >seq220 Length=67240 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||||||||| | || || || || ||||| |||| Sbjct 22708 CATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACGCTCGAGGTGGAGTCGTC 22649 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| || | || || || || || ||||| || ||||| || || || || Sbjct 22648 CGACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 22589 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| || || | ||||||||| || | || || | || | || |||||||| Sbjct 22588 GCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACGCTCTCGGATTACAA 22529 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| || |||||| ||| | || | || | ||| |||| |||||| Sbjct 22528 CATCCAGAAGGAGAGCACCCTGCACCTCGTGCTTCGTCTGCGTGGTGGC 22480 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26982 TACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAA 27041 ||| |||||||||| || || || || || ||||||||| | || || || || || || Sbjct 23567 TACACCATGCAGATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAG 23508 Query 27042 CCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCC 27101 | |||| | || || | ||||| || || || ||||| || || || || ||| Sbjct 23507 TCCAGCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCC 23448 Query 27102 GATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGAT 27161 || || ||||| | || | ||| ||||| || | || ||| | || | || ||| Sbjct 23447 GACCAGCAGCGCCTTATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGTACGCTGTCTGAT 23388 Query 27162 TACAACATTCAAAAGGAGTCGACC 27185 |||||||| || |||||||| ||| Sbjct 23387 TACAACATCCAGAAGGAGTCCACC 23364 >seq379 Length=45813 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || || || || || | || Sbjct 38745 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACGCTCGAGGTTGAGTCCTCG 38686 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | ||||| || || || ||||| || ||||| || || || || Sbjct 38685 GACACGATTGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 38626 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | || |||| || |||||| Sbjct 38625 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGGCGCACTCTTTCTGACTACAAC 38566 Query 27168 ATTCAAAAGGAG 27179 ||||| |||||| Sbjct 38565 ATTCAGAAGGAG 38554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434912463363840