Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq379 100 2e-16 seq220 95.1 1e-14 seq13 91.5 1e-13 >seq379 Length=45813 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||||||||| || || || || || || | ||| || || |||| |||||||| Sbjct 38543 TGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCCTCAAGCTGC 38602 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||| | || | || ||| |||||| ||| ||| Sbjct 38603 TTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTC 38662 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | ||| || ||||| || || | |||||| | || || || Sbjct 38663 GCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCGGT 38721 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 38722 CAAGGTCTTCACGAAGATCTGCAT 38745 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| ||||| ||| || || ||||| || || | || || || | || |||||||| Sbjct 38823 ATGCAGCGTAGACTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGCTG 38882 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || || ||||||||||| | || | || ||| |||||| ||| || Sbjct 38883 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTT 38942 Query 39201 CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | || | ||| | | | || || ||||| || |||| |||||| | || || | Sbjct 38943 CGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCGG 39001 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| || |||||||| ||||| Sbjct 39002 TGAGCGTCTTTACAAAGATCTGCAT 39026 >seq220 Length=67240 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || |||||||| || || || || ||||| | || || || | || || ||||| Sbjct 22505 TGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCATCCTCGAGCTGC 22564 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || | ||||||||||| | || | || ||| |||||| ||| ||| Sbjct 22565 TTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTC 22624 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 || | ||| | | | ||| ||| ||||||||| || | |||||| | || || || Sbjct 22625 GCCTTCA-CGTTGTCGATCGTGTCGGACGACTCCACCTCGAGCGTGATGGTCTTGCCGGT 22683 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || ||| || || ||||| ||||| Sbjct 22684 CAACGTCTTGACGAAGATCTGCAT 22707 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || ||||| | || || || |||| || ||||| Sbjct 23359 TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGCGTACGGCCGTCCTCGAGCTGC 23418 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 |||||||| || ||||| ||||||||||||| || | | ||| |||||| ||| || Sbjct 23419 TTGCCCGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTG 23478 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| | | | || ||||| ||||| || || | ||||| | || || || Sbjct 23479 GCCTTGACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTA 23538 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 23539 AGGGTCTTCACGAAGATCTGCAT 23561 >seq13 Length=301256 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 39076 ACCAA-ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| |||||| || ||| || || || || ||||||| ||| || || |||| || Sbjct 245371 ACCAAGATGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTC 245430 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| || || || || ||||||||||| | ||| | || ||| |||||| Sbjct 245431 GAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 245490 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| ||| || | | | | || || |||||| || || | |||||| | || Sbjct 245491 GATCTTCGCCTTCACATTGTCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTT 245550 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || || || ||||| Sbjct 245551 GCCGGTGAGCGTCTTCACGAATATCTGCAT 245580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429539883284996