Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq339 116 3e-21 seq220 89.7 3e-13 seq13 84.2 1e-11 >seq339 Length=34629 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| ||||| ||||| ||||| ||||| || || ||| || Sbjct 18644 ATGCAGATTTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTCGAGTCCTCG 18703 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || ||| | ||||| || || Sbjct 18704 GACACGATCGACAATGTCAAGGC-CAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCA 18762 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || ||||| || || || |||| ||||| | |||| ||||| Sbjct 18763 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTGAGCGACTACAA 18822 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 18823 CATCCAGAAGGAGTCCAC 18840 >seq220 Length=67240 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| ||||| ||||| |||| Sbjct 23561 ATGCAGATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCCAGC 23502 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | | ||||| || ||| | || || || || Sbjct 23501 GACACCATCGACAATGTCAAGGCCAAGA-TCCAGGACAAGGAGGGTATTCCTCCCGACCA 23443 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || ||||| || || || |||| || || | |||||||| Sbjct 23442 GCAGCGCCTTATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGTACGCTGTCTGATTACAA 23383 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 23382 CATCCAGAAGGAGTCCAC 23365 >seq13 Length=301256 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || ||||| || || || ||||| ||||| || || || | Sbjct 245580 ATGCAGATATTCGTGAAGACGCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCT 245521 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || | || | | ||||| || || | || || || || Sbjct 245520 GACACTATCGACAATGTGAAGGCGAAGA-TCCAGGACAAGGAGGGCATTCCCCCGGACCA 245462 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || ||||| || || || |||| || || | ||||||||| Sbjct 245461 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCCGATTACAA 245402 Query 23790 CATACAAAAAGAGTCCACATTACAT 23814 ||| || || ||||| || ||||| Sbjct 245401 CATCCAGAAGGAGTCTACCCTACAT 245377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338005101514736