Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq13 149 1e-30 seq220 136 9e-27 seq379 132 1e-25 seq339 132 1e-25 >seq13 Length=301256 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || || || || || | |||||||| | | ||| | ||||| Sbjct 244858 AGGACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGAGAGAGTGCGACCATCC 244917 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||||||||| |||||||| || || || ||||||||||| || || |||||||| Sbjct 244918 TCAAGCTGCTTCCCCGCGAAGATCAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCC 244977 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| || || ||||| || | || || || || ||||||||| Sbjct 244978 TGAATCTTCGCCTTCACGTTGTCAATTGTGTCCGATGACTCGACCTCCAAGGTGATCGTC 245037 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | |||||| Sbjct 245038 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 245069 Score = 141 bits (156), Expect = 2e-28 Identities = 156/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 ||||||| || || || || || |||| ||||| |||| || || | ||||| || | Sbjct 245654 CAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTCCGACCATCCTCAA 245713 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||||||||| ||||| || || || |||||||| ||||| || |||||||| |||| Sbjct 245714 GCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGA 245773 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||| || ||||||||||| |||| || || || | ||||| ||||||| Sbjct 245774 TCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGC 245833 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 | || | ||| || | ||| | ||||| Sbjct 245834 CAGTGAGAGTCTTAACGAAGATCTGCAT 245861 Score = 127 bits (140), Expect = 5e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||| || || || || || || |||| |||||||||| | || | || || || | Sbjct 245373 CAAGATGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTCGA 245432 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||| ||||||||||| || || || ||||| || ||||| || |||||||| |||| Sbjct 245433 GCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGA 245492 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||||||| ||||| ||||| || | || || || | |||||| ||||||| Sbjct 245493 TCTTCGCCTTCACATTGTCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGC 245552 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 | || | || || | ||| | ||||| Sbjct 245553 CGGTGAGCGTCTTCACGAATATCTGCAT 245580 >seq220 Length=67240 Score = 136 bits (150), Expect = 9e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 ||||||| || ||||| || || |||| |||||||| | || || | || || || | Sbjct 23354 CAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGCGTACGGCCGTCCTCGA 23413 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||| || ||||||||||| || || |||||||| |||||||| |||||||| |||| Sbjct 23414 GCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGA 23473 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||| ||| ||||||||||| || || || || | ||||| ||||||| Sbjct 23474 TCTTGGCCTTGACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGC 23533 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 | || | || || | ||| | ||||| Sbjct 23534 CGGTAAGGGTCTTCACGAAGATCTGCAT 23561 >seq379 Length=45813 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 || || || || || || || |||| |||||| || | | || | ||||| || ||| Sbjct 38821 AGATGCAGCGTAGACTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGC 38880 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| || |||||||| || || || ||||| ||||| || || |||||||| |||||| Sbjct 38881 TGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATC 38940 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || |||||| ||||||||||| |||| || || || ||||||||||||||||| Sbjct 38941 TTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCG 39000 Query 225688 GTCAAAGTTTTTATGAACACTTGCAT 225713 || | || |||| || | ||||| Sbjct 39001 GTGAGCGTCTTTACAAAGATCTGCAT 39026 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||||||||| || || || || |||| || || |||| | || | ||||| || | Sbjct 39379 CAAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCCTCGA 39438 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||| |||||||||||||| || || |||||||| || || || |||||||| |||| Sbjct 39439 GCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGA 39498 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||| ||| ||||| ||||| |||| || || || | ||||| ||||||| Sbjct 39499 TCTTGGCCTTGACATTGTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGC 39558 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 | || | || || | ||| | ||||| Sbjct 39559 CGGTGAGGGTCTTGACGAAAATCTGCAT 39586 >seq339 Length=34629 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 ||||| || ||||| || || |||| ||||| ||| || || | || || || ||| Sbjct 18849 AGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGC 18790 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| ||||||||||| || || || ||||||||||| ||||| |||||||| |||||| Sbjct 18789 TGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATC 18730 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || ||| ||| ||||| ||||| |||| || || || | ||||| || |||||| Sbjct 18729 TTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCC 18670 Query 225688 GTCAAAGTTTTTATGAACACTTGCAT 225713 || | || || | ||| | ||||| Sbjct 18669 GTAAGGGTCTTGACGAAAATCTGCAT 18644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192514514997848