Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq86 165 7e-36 seq378 122 7e-23 seq202 100 2e-16 >seq86 Length=145559 Score = 165 bits (182), Expect = 7e-36 Identities = 319/468 (68%), Gaps = 2/468 (0%) Strand=Plus/Minus Query 4538 AAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGA 4597 ||||| |||||| || || || ||||| |||||||| | ||| ||||| || || Sbjct 4150 AAACAGTAAACAGGCGAAGTCGGTATGCATGCCTTCGTCGCGAGAAATGAGTTCATTTGA 4091 Query 4598 AAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCC 4657 || || | |||||||| || || | || || |||||||| || | || || || || Sbjct 4090 GAAAGTAAGGCCGGGCATCAAGCCGCGTTTCTTGAGCCAAAAGATGGACGCGAACGAGCC 4031 Query 4658 AGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGC 4717 || ||||| |||||||| || || ||||| || |||| || |||||| | Sbjct 4030 GGAGAAGAAGATGCCTTCGACAGCAGCAAAAGCGACTAGGCGTTCAGCGAACGTCGATTC 3971 Query 4718 TTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTA 4777 ||||| ||||| | |||||||| ||||| ||||| || || || || |||| Sbjct 3970 CTTGTCGGATATCCAGCGCAGTGCCCAGTCCGCTTTCTTCTTCACACATGGGATCGTGTC 3911 Query 4778 TATAGCGTTAAATAATTTACTTTT-TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTA 4836 ||| |||| || | | ||| || | | ||| | || || ||||| || || | Sbjct 3910 TATCGCGTCGAACAGGT-ACTCGCGTTGAGCAGCGTCCTTGATGTACGTGTCGATGAGCA 3852 Query 4837 GGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAG 4896 || ||| | || ||||||||||| || || |||||| || ||||| || | | | Sbjct 3851 GGGAATAAGTCTCCGAATGTATATTCTCCATCATAATCTGGAAGCCGTAGAAAGAGCGCG 3792 Query 4897 CTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGT 4956 |||| | | ||||||||||||| | || | ||||| | ||| || || || || |||| Sbjct 3791 CTTCAGGTGCTTGAACTTCGTTTGAGAAGCGCTCTACGAGGTTCTCATTGACGATGCCGT 3732 Query 4957 CACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGT 5004 | ||||| || || ||||| |||||||| | |||| |||||| Sbjct 3731 CCGAAGCTGCGAAGAAGGCCAACACATGAGAGACGAAGTGACGTTCGT 3684 >seq378 Length=27749 Score = 122 bits (134), Expect = 7e-23 Identities = 356/548 (65%), Gaps = 3/548 (1%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || ||||| ||| |||| || || || | || || || || || ||||| || | Sbjct 7371 CATGCAAATTCAGTGTGCATGCCCTCATCCCGGCATATGAGCTCATTCGAAAATGTGAGG 7312 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 |||||||||| || ||||| || ||||| |||||||| || || || || ||||||||| Sbjct 7311 CCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCGAAGGATCCTGAAAAGAAT 7252 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTA 4727 || || || || || || || || |||||||| |||| ||| | ||| Sbjct 7251 ATACCCTCCACTGCCGCGAAAGCCACTAATCGCACGGCGAATGAGGACCTCTCGTCAGCG 7192 Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTA 4787 ||||| |||| ||||| | | || | | |||| ||| || ||| | ||| | Sbjct 7191 ATCCACTTTAGCGCCCACTCTCCCTTCTCCGAAACGGTCGGCATGGTGGTCAGAGCTGCA 7132 Query 4788 AATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATT 4847 |||| ||| | ||| ||| ||||| || || || | || | ||| ||| | Sbjct 7131 AATAGTTTGGTGCGTTCGCGTGGATCTTGGATGTACGTCTGGATCAAGAGGGAGTACGTC 7072 Query 4848 TCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACT 4907 || ||||| | || || || ||||| || || || || || | ||||| | ||| Sbjct 7071 TCTGAATGAACGTTCTCCATCATGATCTGGAAACCATAGAAACACCGTGCTTCCGCAACT 7012 Query 4908 TGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCA 4967 || || || | |||| ||||| | ||| ||||| || || ||||| || || Sbjct 7011 TGCACCTCAGCGCTGAATCGCTCTACGAGGTTCTCGTTCACGATTCCGTCGGATGCGGCG 6952 Query 4968 AAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTT---TTTTCCAG 5024 || || || | || || || || ||| | ||| | | | |||| | | |||| Sbjct 6951 AAGAAGGCGAGGACGTGTGAGATGAAGCGCCTTTCTCCGTGGGTGAGTTTCGTGTGCCAG 6892 Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084 | | | |||||| | | ||| | |||||| |||||| ||||| |||| ||| | | Sbjct 6891 TCAAGTAGATCTTTGGACAGATCTATTTCTTCGGAAGTCCAGAACGATGCTTGCGCCTGT 6832 Query 5085 TTGTACAT 5092 || ||||| Sbjct 6831 TTATACAT 6824 >seq202 Length=72248 Score = 100 bits (110), Expect = 2e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 ||||| || ||| |||| |||||||||| | ||| |||||||| || || || | Sbjct 46225 CACGCGAACTCAGTGTGCATTCCTTCGTCTCGACAAATGAGTTCGTTGGAGAAAGTGAGG 46166 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 |||||||| | ||| || ||||| ||||| || || || || || || || || || || Sbjct 46165 CCGGGCATGAGACCCCTTTTTTTGAGCCAGAAGATTGCTGCGAACGAGCCCGAGAAAAAG 46106 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGG 4700 || || || || |||||||||||||| | |||| Sbjct 46105 ATTCCCTCCACTGCGGCAAACGCTACGAGTCGG 46073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427043916503636