Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq86 145 1e-29 seq378 100 4e-16 seq202 95.1 2e-14 seq97 91.5 2e-13 >seq86 Length=145559 Score = 145 bits (160), Expect = 1e-29 Identities = 342/515 (66%), Gaps = 6/515 (1%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || ||||| || ||||||| ||||| || || | ||| || || | |||| Sbjct 2093 TCGTTGGAGAAGGTGAGGCCAGGCATTAAACCACGCTTCTTCAACCAGAAGATGGACGCG 2152 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || ||||| ||||| || || || || || || || ||| ||| | ||| ||| | Sbjct 2153 AACGAGCCAGAGAAGAAGATACCCTCGACCGCAGCGAAGGCGACAAGGCGCTCGCCGAAT 2212 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | ||| | || | ||||| || | ||||| || ||||||||||| | ||| || Sbjct 2213 GTCGATTCCTCGTCTGTGATCCAGCGCAGGGCCCAGTCCGCCTTCTTCTTGATACAGGGG 2272 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419 || || || ||||||| ||||| ||| | ||| || || | ||| || || Sbjct 2273 ATGGTCTCGATAGCATCGAAGAGGTAGTCGCGCTGGTTGGGGTCCTTGATGTACGTGTCG 2332 Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479 || | || || | |||||||| || || || || ||||| || ||||| ||| Sbjct 2333 ATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAA 2392 Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539 || || || || | | ||| ||||| | |||| || || | |||||| || || Sbjct 2393 CACCTTGCCTCGGCGGCCTGGACCTCGTTGGAAAAGCGCTCGAGAAGATTCTCGTTGACA 2452 Query 48540 ATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAA 48599 || || ||| ||||| || || || | ||||| || || | |||||| | Sbjct 2453 ATACCGTCAGAGGCAGCGAAGAAGGCGAGAACATGAGAGATGAAGTGGCGCTCGTTGTCA 2512 Query 48600 GTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 48656 ||| | | | |||||| | | ||||| || | ||| | || ||||| ||||| Sbjct 2513 TTCAGGCGGGTGTGCCAGTCGTGCAAGTCTTTGGACAGATCCATCTCCTCAGCGGTCCAG 2572 Query 48657 AATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 || || ||||| || || || ||||| | ||| || Sbjct 2573 AAGGACGCCTCGGCCTTCTTGTACATTTGCCAGAT 2607 Score = 134 bits (148), Expect = 2e-26 Identities = 373/568 (66%), Gaps = 8/568 (1%) Strand=Plus/Minus Query 48131 AAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGA 48190 ||||| |||||| || || || ||| | ||||| || | | ||| | ||| || || Sbjct 4150 AAACAGTAAACAGGCGAAGTCGGTATGCATGCCTTCGTCGCGAGAAATGAGTTCATTTGA 4091 Query 48191 AAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCC 48250 || || || |||||||| | || ||||| ||||||||||| || | |||||| || || Sbjct 4090 GAAAGTAAGGCCGGGCATCAAGCCGCGTTTCTTGAGCCAAAAGATGGACGCGAACGAGCC 4031 Query 48251 AGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTC 48310 || ||||| |||||||| || || ||||| ||| || | || || | | | ||| Sbjct 4030 GGAGAAGAAGATGCCTTCGACAGCAGCAAAAGCGACTAGGCGTTCAGCGAACGTCGATTC 3971 Query 48311 GTTGT---GTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTC 48367 |||| |||||| || ||||||| || || |||||||| ||||| || || || || Sbjct 3970 CTTGTCGGATATCCAGCGCAGTGCCCAGTCCGCTTTCTTCTTCACACATGGGATCGTGTC 3911 Query 48368 TATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAG 48427 ||| || | || || | | || | || || | ||| || || || | || Sbjct 3910 TATCGCGTCGAACAGGTACTCGCGTTGAGCAGCGTCCTTGATGTACGTGTCGATGAGCAG 3851 Query 48428 ACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGC 48487 ||| | || || || ||||| || || ||||| || ||||| ||| | | ||| Sbjct 3850 GGAATAAGTCTCCGAATGTATATTCTCCATCATAATCTGGAAGCCGTAGAAAGAGCGCGC 3791 Query 48488 TTC-TGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCAT 48546 ||| ||| | || || || | | || || || | | |||||||| || || || | Sbjct 3790 TTCAGGTGCT-TGAACTTCGTTTGAGAAGCGCTCTACGAGGTTCTCATTGACGATGCCGT 3732 Query 48547 CACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA--- 48603 | ||| || || || || || ||||| | || | |||||| | | | Sbjct 3731 CCGAAGCTGCGAAGAAGGCCAACACATGAGAGACGAAGTGACGTTCGTTATCATTGAGGC 3672 Query 48604 GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATG 48663 | ||||||||||| |||||||| || | | ||| || | |||||| || |||| Sbjct 3671 GGTTATTCCAGTCCCAGATATCTTGGGAAAGCGTGATTTCCTCTGTTGTCCAGAAGGATG 3612 Query 48664 CCTCTGCTTTTTTATACATATTCCATAT 48691 || || | || ||||| ||||| || Sbjct 3611 ACTGGGCCTGCTTGTACATCTTCCAGAT 3584 >seq378 Length=27749 Score = 100 bits (110), Expect = 4e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 |||||||| ||| || | || ||||| | | || | || || ||||||||||| Sbjct 7371 CATGCAAATTCAGTGTGCATGCCCTCATCCCGGCATATGAGCTCATTCGAAAATGTGAGG 7312 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 ||||||||||| || | || |||||||| ||||| || ||||| ||||| ||||||||| Sbjct 7311 CCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCGAAGGATCCTGAAAAGAAT 7252 Query 48261 ATGCCTTCTACGGCCGCAAATGC 48283 || || || || ||||| || || Sbjct 7251 ATACCCTCCACTGCCGCGAAAGC 7229 >seq202 Length=72248 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 ||||| |||| || ||| | |||||| || || ||||| |||||||| || || | |||| Sbjct 46204 CCTTCGTCTCGACAAATGAGTTCGTTGGAGAAAGTGAGGCCGGGCATGAGACCCCTTTTT 46145 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 |||||||| || ||||| ||||| || || || || || || || || || || ||||| Sbjct 46144 TTGAGCCAGAAGATTGCTGCGAACGAGCCCGAGAAAAAGATTCCCTCCACTGCGGCAAAC 46085 Query 48282 GC 48283 || Sbjct 46084 GC 46083 >seq97 Length=131314 Score = 91.5 bits (100), Expect = 2e-13 Identities = 129/179 (72%), Gaps = 3/179 (2%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || | |||||||| |||| || ||||| || |||||||||||||||| |||| Sbjct 124581 TCGTTGGAGTACGTGAGACCTGGCAGGAGACCACGCTTCTTGAGCCAAAATATTGACGCG 124640 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTC-TCTCCGTA 48301 || |||||||| ||||| || ||||| | || || ||| |||||| | | Sbjct 124641 AACGATCCAGAGAAGAAAATTCCTTCCGCACAAGCGAAAGCGACTAGTCTCATGGCAAAG 124700 Query 48302 ACTGGCT--TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG 48358 || || | || | |||||| || || |||||||| |||||| |||| || | ||| Sbjct 124701 GATGCCTGCTTGTCATCTATCCATCGATGGGCCCAATCCGCCTTCCTCTTCACGCTAGG 124759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694659317770880