Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq13 118 2e-21 seq379 109 1e-18 seq220 104 5e-17 seq339 102 2e-16 >seq13 Length=301256 Score = 118 bits (130), Expect = 2e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| |||||||| || ||||||||||| |||| | || | ||||| || | Sbjct 245654 CAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTCCGACCATCCTCAA 245713 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||||| || ||||| || | ||||||||| | | || || ||||| || || | Sbjct 245714 GCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGA 245773 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | |||| || ||| || || ||||| || || |||| Sbjct 245774 TCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGC 245833 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| ||||||| |||||| Sbjct 245834 CAGTGAGAGTCTTAACGAAGATCTGCAT 245861 Score = 109 bits (120), Expect = 1e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 ||||||| || |||||||| || |||||||||||||||| | || | || || || | Sbjct 245373 CAAGATGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTCGA 245432 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| || | ||||||||||| | || || ||||| || || | Sbjct 245433 GCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGA 245492 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | |||| || ||| || || || || || || |||| Sbjct 245493 TCTTCGCCTTCACATTGTCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGC 245552 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||||||||| | |||||| Sbjct 245553 CGGTGAGCGTCTTCACGAATATCTGCAT 245580 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || || || ||||| || || ||||||||||| | | ||| | ||||| Sbjct 244857 GAGGACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGAGAGAGTGCGACCATC 244916 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||||| |||||||| || | ||||||||| | || |||||| ||||| || Sbjct 244917 CTCAAGCTGCTTCCCCGCGAAGATCAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTC 244976 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || || || | || | |||| || ||| || || | || || || Sbjct 244977 CTGAATCTTCGCCTTCACGTTGTCAATTGTGTCCGATGACTCGACCTCCAAGGTGATCGT 245036 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || | ||||| ||||||| ||||| Sbjct 245037 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 245069 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || ||||| || ||||| || || |||||||| |||| | || | || || Sbjct 245085 GAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCGTC 245144 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| | | ||||||||||| || ||| || ||||| || Sbjct 245145 CTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGGATACCCTCCTTATC 245204 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | | || ||| ||| || || || || || || Sbjct 245205 CTGGATCTTCGCCTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGCGTGATGGT 245264 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || | ||||| ||||||| |||||| Sbjct 245265 CTTGCCAGTCAACGTCTTGACGAAGATCTGCAT 245297 >seq379 Length=45813 Score = 109 bits (120), Expect = 1e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || |||||||| || |||||||| || |||| | || | ||||| || | Sbjct 39379 CAAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCCTCGA 39438 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || ||||||||||| | ||||||||| | | ||| || ||||| || || | Sbjct 39439 GCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGA 39498 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| || ||| || ||||| || || || |||| Sbjct 39499 TCTTGGCCTTGACATTGTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGC 39558 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| ||||| | |||||| Sbjct 39559 CGGTGAGGGTCTTGACGAAAATCTGCAT 39586 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||| || || |||||||| || | | ||| | ||| || Sbjct 38534 AGGACGAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCC 38593 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| || ||| || ||||| || Sbjct 38594 TCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 38653 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | |||| || ||| || || || || || || Sbjct 38654 TGGATCTTCGCCTTGACGTTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTC 38713 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || | ||||||||||||| |||||| Sbjct 38714 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 38745 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 ||||| || |||||||| || ||||| ||||| || | | || | ||||| || || Sbjct 38821 AGATGCAGCGTAGACTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGC 38880 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 || ||||||||||| || | ||||||||| | || ||| || ||||| || || || Sbjct 38881 TGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATC 38940 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || || || | || | | |||| || ||| || || | || || || ||||| Sbjct 38941 TTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCG 39000 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || |||| |||||| Sbjct 39001 GTGAGCGTCTTTACAAAGATCTGCAT 39026 >seq220 Length=67240 Score = 104 bits (114), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || |||||||||||||| | | || | || || || | Sbjct 23354 CAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGCGTACGGCCGTCCTCGA 23413 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || ||||||||||| | ||||||||| | | || || ||||| || || | Sbjct 23414 GCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGA 23473 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 | || |||||| | || | | ||| ||| | ||| || || || || || || || Sbjct 23474 TCTTGGCCTTGACATTGTCGATGGTGTCGCTGGA--CTCAACCTCGAGGGTGATGGTCTT 23531 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || ||||||||||||| |||||| Sbjct 23532 GCCGGTAAGGGTCTTCACGAAGATCTGCAT 23561 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| || |||||||||||||| | | || | |||||| || || || |||||||| Sbjct 22516 CTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAA 22575 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| | | ||||||||||| || ||| || ||||| || || || || || || | Sbjct 22576 GATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 22635 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | |||| || ||| || || || || || || ||||| || | ||||| || Sbjct 22636 GTCGATCGTGTCGGACGACTCCACCTCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGAC 22695 Query 152093 GAAGACCTGCAT 152104 ||||| |||||| Sbjct 22696 GAAGATCTGCAT 22707 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| |||||||| || |||||||| ||||||||||| || | | ||| | || || Sbjct 23008 GAGGACGAGATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTC 23067 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCG 151992 || || || |||||||||||||| | ||||||||||| Sbjct 23068 CTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCCG 23108 >seq339 Length=34629 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 || ||||| || ||||| || ||||||||||| ||| | || | || || || || Sbjct 18849 AGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGC 18790 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 || || |||||||| || | ||||||||| | || ||| || ||||| || || || Sbjct 18789 TGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATC 18730 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || |||||| | || | |||| || ||| || || || || || ||||||||| Sbjct 18729 TTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCC 18670 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| | |||||| Sbjct 18669 GTAAGGGTCTTGACGAAAATCTGCAT 18644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153804656604732