Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq379 163 7e-35 seq13 149 2e-30 seq220 140 8e-28 seq339 132 1e-25 seq60 87.8 4e-12 >seq379 Length=45813 Score = 163 bits (180), Expect = 7e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || |||||||| ||||| || ||| ||| Sbjct 39583 CAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGAC 39524 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || |||||||| |||||||| Sbjct 39523 ACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAG 39464 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || |||||||| ||||| | || ||| |||| |||||| || Sbjct 39463 CGCCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTTTCCGACTATAACATC 39404 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || || || || || |||| || Sbjct 39403 CAGAAGGAGTCTACCCTCCACCTTGGTT 39376 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || |||||||| | ||||| || ||| ||| Sbjct 39023 CAGATCTTTGTAAAGACGCTCACCGGCAAGACGATCACGTTGGAGGTCGAGTCCTCGGAC 38964 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| || || ||||| || |||||||| Sbjct 38963 ACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAG 38904 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | || || | || || || || Sbjct 38903 CGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTCTCGGACTACAATATC 38844 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || || |||||||| Sbjct 38843 CAGAAGGAGTCTACGCTGCATCT 38821 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || | || || || || ||||| |||||||| || ||| ||| Sbjct 38742 CAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACGCTCGAGGTTGAGTCCTCGGAC 38683 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 38682 ACGATTGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAG 38623 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || | |||||| | || || ||| | Sbjct 38622 CGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGGCGCACTCTTTCTGACTACAACATT 38563 Query 178104 CAAAAAGA 178111 || || || Sbjct 38562 CAGAAGGA 38555 >seq13 Length=301256 Score = 149 bits (164), Expect = 2e-30 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || ||||| |||||||| || ||| ||| Sbjct 245858 CAGATCTTCGTTAAGACTCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCCTCCGAC 245799 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || ||||| |||||||| Sbjct 245798 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAGCAG 245739 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| |||| || |||| || ||| || Sbjct 245738 CGCCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGTCGGACGCTGTCCGACTACAACATC 245679 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 245678 CAGAAGGAGTCTACCCTTCACCTTG 245654 Score = 145 bits (160), Expect = 2e-29 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || ||||| |||||||| || || ||| Sbjct 245577 CAGATATTCGTGAAGACGCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCTGAC 245518 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| || || || || ||||||||||| Sbjct 245517 ACTATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 245458 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| || || | || ||| ||||||| ||| || Sbjct 245457 CGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCCGATTACAACATC 245398 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || ||||||| Sbjct 245397 CAGAAGGAGTCTACCCTACATCTTG 245373 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || ||||||||| | ||||| || || ||| Sbjct 245066 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACCTTGGAGGTCGAGTCATCGGAC 245007 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || |||||||||||||| || |||||||| || |||||||| Sbjct 245006 ACAATTGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGAATCCCGCCCGACCAGCAG 244947 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | ||||| | ||||| ||| | Sbjct 244946 CGTCTGATCTTCGCGGGGAAGCAGCTTGAGGATGGTCGCACTCTCTCGGATTACAACATT 244887 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| ||||| Sbjct 244886 CAGAAGGAGTCGACCCTGCACCTTGT 244861 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || ||||| |||||||| || || || Sbjct 245294 CAGATCTTCGTCAAGACGTTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCTTCTGAT 245235 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| ||||| || || || ||||| ||||||||||| Sbjct 245234 ACCATCGACAACGTCAAGGCGAAGATCCAGGATAAGGAGGGTATCCCGCCGGACCAGCAG 245175 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || ||||| || || || | || || |||| || ||| | Sbjct 245174 CGCTTGATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGTACCCTCTCCGACTACAACATT 245115 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 245114 CAGAAGGAGTCGACGCTTCACCTCGT 245089 >seq220 Length=67240 Score = 140 bits (154), Expect = 8e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || |||||||||||||| || | ||| Sbjct 23558 CAGATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGAC 23499 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || || ||||| |||||||| Sbjct 23498 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAGCAG 23439 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || |||||||| || || | || || | ||||| ||| || Sbjct 23438 CGCCTTATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGTACGCTGTCTGATTACAACATC 23379 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 23378 CAGAAGGAGTCCACCCTTCACCTTG 23354 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || ||||| ||||||||||| || ||| Sbjct 22704 CAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACGCTCGAGGTGGAGTCGTCCGAC 22645 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| || || ||||| ||||||||||| Sbjct 22644 ACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAG 22585 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || |||||||| ||||| | || || | ||||| ||| || Sbjct 22584 CGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACGCTCTCGGATTACAACATC 22525 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || Sbjct 22524 CAGAAGGAGAGCACCCTGCACCTCGT 22499 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 ||||||||||||||||| || |||||||||||||| || ||||| || || || | ||| Sbjct 23115 ATCCCTCCGGACCAGCAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACT 23056 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||| | || || ||| |||| ||||| || || || ||||| || Sbjct 23055 CTTTCGGACTACAACATCCAGAAAGAGTCGACGCTTCATCTCGT 23012 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || |||||||| || ||||| || ||||| || Sbjct 22989 CAGATTTTCGTCAAGACCCTCACCGGCAAGACGATCACTCTGGAGGTCGAGAGCTCGGAT 22930 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| ||||| || |||||||||||||| || || Sbjct 22929 ACCATCGACAACGTTAAGGCGAAGATTCAGGACAAGGAGGG 22889 >seq339 Length=34629 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || || ||||| |||||||||||||| || ||| ||| Sbjct 18647 CAGATTTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTCGAGTCCTCGGAC 18706 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 18707 ACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAGCAG 18766 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || || || | || || ||| || ||| || Sbjct 18767 CGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTGAGCGACTACAACATC 18826 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || || || || || Sbjct 18827 CAGAAGGAGTCCACCCTTCACCT 18849 >seq60 Length=177480 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || ||||||||||| |||||||| || ||| Sbjct 142130 CAGATTTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 142071 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| |||||||| ||||| |||||||| || || Sbjct 142070 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGG 142030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203714358295848