Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq8 109 7e-19 >seq8 Length=1407489 Score = 109 bits (120), Expect = 7e-19 Identities = 267/405 (66%), Gaps = 0/405 (0%) Strand=Plus/Plus Query 53968 AACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT 54027 ||||| | | | || ||||||||| | |||||||| | | ||| ||||| || | | Sbjct 620067 AACATCGGCAAGACCTGGACATTCAGCTGGACACATGAGGGTCCAATCTCCATCGGCTTC 620126 Query 54028 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 54087 || || ||||| || |||||||| ||||| ||||| || | ||| | | || | Sbjct 620127 GACACGCTTCATGAAAAGATCAGGGATCCAGAGAGCGTAGAACAAATCACGAGCTCGAAC 620186 Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147 ||| || || || ||| || ||||||||||| | | || ||| | ||||| || Sbjct 620187 TTCTTCTTTACCGTGATTTTTACGGAGATCGAGGAAATCGAAAACATCGGCGTGCCATGG 620246 Query 54148 TTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 54207 ||| | ||| || | | | | || || | ||||| || || || || | |||||| || Sbjct 620247 TTCGAGGTAGATAGCGAAAGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTATCTGGC 620306 Query 54208 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 54267 ||| | || |||| | |||||||| ||||| || || ||| ||||| |||| Sbjct 620307 GGTAGCGTCGAAAGCTCTAAGCATTGGAACGATACCGTTAGAGTAACCGTTGGTACCGGC 620366 Query 54268 GATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTT 54327 || || || | ||||| || || || ||||| || || || || |||| Sbjct 620367 AATGTATGAACCTTTAGCACGGATGTTGTGGATGTGGAGACCGATACCACCAGCAGTTTT 620426 Query 54328 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 54372 ||||||| || || || || || || ||||| || || || Sbjct 620427 AGAGATTTGAGCACAAATCTTCAAAGTGTCGTAGATACCGTCAAT 620471 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 54518 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 54577 || || || || ||||||||||| | |||||| ||||||||||| ||||| || ||| Sbjct 620654 TGGATACCAACGGCGACACGCATAATCATGTGTTGAGGTCTTTCGACGATTTTACCGTTG 620713 Query 54578 ATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 54637 ||| | || | || ||| || | || || ||||| ||||||||||| | || || Sbjct 620714 ATTCTAAGAAGATAAGATCGCTCAAGGGTCTTGAAACCGAAATAGTTGTAAGCGAAATCA 620773 Query 54638 CGTTCGTAAATAATAACTGAGTTGAG 54663 || ||||| || ||| | || | ||| Sbjct 620774 CGATCGTAGATGATAGCAGAATCGAG 620799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721377354400