Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq13 141 1e-28 seq1 104 4e-17 >seq13 Length=1031976 Score = 141 bits (156), Expect = 1e-28 Identities = 174/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || || || ||||| || ||| | || ||||| || Sbjct 993192 ATGCAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCC 993251 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | ||| || || ||||| ||||| ||||| ||||| |||||| Sbjct 993252 GACACCATCGACAACGTTAAATCCAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 993311 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | ||||| || || |||||||||||||| |||| ||| | ||| || || Sbjct 993312 CAAAGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAAC 993371 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||||||| | ||||||||| | | ||||| |||||||| ||| || Sbjct 993372 ATTCAAAAAGAATCAACCCTTCATTTGGTTCTTAGATTACGTGGTGGTATGCAAATTT 993429 Score = 132 bits (146), Expect = 7e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || || || || ||||| || | || ||||| || | Sbjct 993420 ATGCAAATTTTCGTCAAAACCCTCACCGGAAAGACTATCACCCTCGAAGTTGAATCATCT 993479 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | || ||||||||||| ||||| ||||| ||||| || ||| Sbjct 993480 GATACTATCGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAA 993539 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || || || || |||||||| || ||| || |||| ||| ||||| || Sbjct 993540 CAGAGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTAGAACTTTATCGGATTACAAC 993599 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||| ||||||||| | |||||||| | ||| | |||||||||| ||| || Sbjct 993600 ATCCAAAAGGAATCAACTCTTCATTTGGTCCTTCGTCTCAGAGGTGGTATGCAAATTT 993657 Score = 123 bits (136), Expect = 4e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 124560 CTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAA 124619 || || || ||||| || || | || | ||| | |||||| || ||| | ||| Sbjct 993724 CTTACCGGTAAAACCATCACCCTCGAAGTCGAATCCTCTGATACTATCGATAACGTTAAA 993783 Query 124620 CAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGA 124679 ||||| ||||||||||||||||| || || || |||||||| || || ||||| || Sbjct 993784 TCCAAAATCCAAGATAAAGAAGGTATCCCCCCAGACCAACAAAGACTCATCTTTGCCGGT 993843 Query 124680 AAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTG 124739 ||||| || || ||| || |||| || ||||| ||||| ||||| || || || | Sbjct 993844 AAACAGTTGGAAGATGGTAGAACCTTGTCTGATTACAATATCCAAAAGGAGTCTACACTT 993903 Query 124740 CATTTGGTTTTACGTTTACGAGGTGG 124765 ||||||||||||||| |||| ||||| Sbjct 993904 CATTTGGTTTTACGTCTACGTGGTGG 993929 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || || |||||||| || | || | ||| | Sbjct 992964 ATGCAAATCTTTGTTAAAACTCTTACTGGTAAAACTATCACCCTTGAAGTCGAATCTTCA 993023 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| || || ||||| || ||||| || ||||| || ||| Sbjct 993024 GACACCATTGATAACGTTAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAA 993083 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | ||||| || || ||||||||||||||| |||| ||| | ||||| || Sbjct 993084 CAGCGTTTGATTTTCGCTGGTAAACAATTAGAGGATGGTCGTACACTCTCCGATTACAAC 993143 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | || |||||| | | ||||| |||||||| Sbjct 993144 ATTCAAAAAGAATCCACCCTCCACTTGGTTCTCAGATTACGTGGTGGTAT 993193 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 124559 ACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAA 124618 ||| || || ||||| || || | ||| ||||| | ||| || ||| ||| | || Sbjct 992381 ACTCACGGGTAAAACCATCACACTCGAGGTTGAATCCTCTGACACCATTGACAATGTCAA 992440 Query 124619 ACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGG 124678 | || |||||||| || |||||||| ||||||||||||||| | | || ||||| || Sbjct 992441 ATCCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAACAACGTTTGATCTTTGCTGG 992500 Query 124679 AAAACAATTAGAGGATAGTCGAAC 124702 |||||||| || || || |||| Sbjct 992501 TAAACAATTGGAAGACGGTAGAAC 992524 >seq1 Length=2409791 Score = 104 bits (114), Expect = 4e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 124560 CTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAA 124619 || || || ||||| || || | ||| |||| || || || || ||| | ||| Sbjct 586309 CTTACGGGTAAAACCATCACCCTCGAGGTTGAGTCATCCGACACCATCGATAACGTTAAA 586250 Query 124620 CAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGA 124679 ||||| ||||||||||||||||| ||||| || |||||| | | || || || || Sbjct 586249 TCCAAAATCCAAGATAAAGAAGGTATCCCACCAGACCAACAACGTTTGATCTTCGCTGGT 586190 Query 124680 AAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTG 124739 |||||||| || || || |||| | |||||| || || ||||| ||||| || | Sbjct 586189 AAACAATTGGAAGACGGTAGAACTCTTTCAGATTACAACATCCAAAAGGAATCTACCCTT 586130 Query 124740 CATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||||||| | | ||||| |||||| Sbjct 586129 CATTTGGTTCTTAGATTACGTGGTGGT 586103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455716704000