Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq13 129 5e-25 seq1 86.0 5e-12 >seq13 Length=1031976 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || |||||||| | |||||||||| || || ||||||||||||||||||||| Sbjct 993192 TACCACCACGTAATCTGAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGG 993133 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || || |||||| | ||||| |||||| | || | |||||| || || || | Sbjct 993132 AGAGTGTACGACCATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTG 993073 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| || || |||||| | || | |||||| | |||| Sbjct 993072 GAATTCCTTCCTTGTCTTGGATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGA 993013 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | ||||| || || |||||||| ||||| || ||||| Sbjct 993012 CTTCAAGGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || |||||||| | ||||| || | || || ||||||||||||||||| | | Sbjct 993420 TACCACCACGTAATCTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGT--C 993363 Query 118570 TCATAGTG--CGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627 | | |||| || ||||| | ||||| || ||| | || | | || ||||| || Sbjct 993362 TGAGAGTGTACGACCGTCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGG 993303 Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCT 118686 || || ||||| |||||| || || |||||| | |||| |||||| | || | | Sbjct 993302 TGGGATACCCTCTTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGATGAT-T 993244 Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || | || | ||||| || || |||||||| || || || ||||| Sbjct 993243 CAACTTCCAAAGTGATGGTTTTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 >seq1 Length=2409791 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || |||||||| | ||||| || | ||||| || ||||| ||||||||||| Sbjct 586103 ACCACCACGTAATCTAAGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGA 586162 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||| | || || | ||||| |||||| |||| | ||| || || || || || Sbjct 586163 AAGAGTTCTACCGTCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGG 586222 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || || || ||| ||||| |||||| | |||| |||||| | ||| || Sbjct 586223 GATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAAC 586282 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAG 118717 ||||| ||| | ||||| || || || Sbjct 586283 CTCGAGGGTGATGGTTTTACCCGTAAG 586309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830241380760