Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq13 93.3 3e-14 >seq13 Length=1031976 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || ||||| | | |||| |||||||| || || ||||| || ||||| || | Sbjct 993930 TCCACCACGTAGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGA 993871 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| ||| ||||||||| ||||| || ||| |||| ||||||||||| || ||| Sbjct 993870 CAAGGTTCTACCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGG 993811 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| |||| || || | | | ||| ||| || ||| Sbjct 993810 GATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGAC 993751 Query 18278 TTCAATGGTGATGCTTTTGCCGGT 18301 ||| | ||||||| |||| ||||| Sbjct 993750 TTCGAGGGTGATGGTTTTACCGGT 993727 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || |||| |||||| |||| ||||| |||||||||||||||||||||||||| | Sbjct 993418 CCACCACGTAATCTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAG 993359 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 | ||| || || || |||||||| || || | || | |||||||||||| Sbjct 993358 AGTGTACGACCGTCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATC 993306 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| |||| ||||| |||||||| ||||| |||||||| || | | ||| ||| ||| Sbjct 993632 AAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGATAAAGTTCTACCATC 993573 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 |||||||||||| || || |||| | ||| ||||| || || | || || || || Sbjct 993572 TTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGGATACCCTCTTTGTC 993513 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||||| |||||| | | | ||| ||| | || ||| | |||||| | Sbjct 993512 TTGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCAACTTCGAGGGTGATAGT 993453 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| | ||||| || ||||||||||| Sbjct 993452 CTTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || |||| ||| || |||| ||| || || |||||||||||||||||||| |||| Sbjct 993190 CCACCACGTAATCTGAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAG 993131 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| || ||| || |||||||| || || | || | | ||||| || || Sbjct 993130 AGTGTACGACCATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGA 993071 Query 18219 ACGCCTTCCTTATC--GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | |||||||| || || || | | || || | ||| ||||| | ||| Sbjct 993070 ATTCCTTCCTTGTCTTGGATCTTGGAT--TTAACGTTATCAATGGTGTCTGAAGATTCGA 993013 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||||| |||| || || | ||||| ||||| |||||||| Sbjct 993012 CTTCAAGGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343861302350