Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq8 165 7e-36 seq13 136 4e-27 >seq8 Length=1407489 Score = 165 bits (182), Expect = 7e-36 Identities = 625/977 (64%), Gaps = 49/977 (5%) Strand=Plus/Plus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 ||||| ||||| || || || || || ||| || | ||| || | ||||| ||||| Sbjct 619810 GAGGCGAGATTACAAACAGCGACTTCATCTGGGGCAGAGTATTCGATGATTTCAGTACAC 619869 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 | || || |||| || || || | || |||||| ||| ||| | ||| Sbjct 619870 AAGTTACTTGACTTGATTGTACCAAGATGTTGGTGGTTGGATTTGGAGTTGGCAGCGTCC 619929 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 ||||| |||||| | || |||| |||||| || | |||| || || ||| | Sbjct 619930 TTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATAGCGAACCAAAGT 619989 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACG 23264 | ||||| | | ||| | ||||| || ||| |||||| || ||| | | Sbjct 619990 TTTTGAGCTTTGATG-GTCTTTC-TACCTTTACCAGCTTTCTCGTATGATTCGTAAAGCT 620047 Query 23265 CGTCAAATTCGGCACCGT-AACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAG 23322 || | || | || || |||| ||||| || || || ||| || | ||||||||||| Sbjct 620048 CGACGAACTTTTCAGAGTGAACA-TCGGCAAGACCTGGACATT-CAGCTGGACACATGAG 620105 Query 23323 ACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382 |||| | || ||| || || |||| |||||||| || ||||| |||||||| Sbjct 620106 GGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCCAGAGAGCGTA 620165 Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTC--AAATCCAAAAAG 23440 ||||| || || || || || || ||||| || ||| | |||| | | ||| | || Sbjct 620166 GAACAAATCACGAGCTCGAACTTCTTCTTTACC-GTGAT-TTTTACGGAGATCGAGGAAA 620223 Query 23441 TCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTG 23500 || || || || || ||||| || |||||||| | || || || || |||||||| || Sbjct 620224 TCGAAAACATCGGCGTGCCATGGTTCGAGGTAGATAGCGAAAGCACCTGGTCTCTTGTTA 620283 Query 23501 CCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCG 23560 || || || |||||||| | ||| || || | | |||| ||||| || |||| |||| Sbjct 620284 CCACCTTGGTCGACGTATCTGGCGGTAGCGTCGAAAGCTCTAAGCATTGGAACGATACCG 620343 Query 23561 TTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGG 23620 || || ||| || || | |||||||| || || | |||||| | |||| Sbjct 620344 TTAGAGTAACCGTTGGTACCGGCAATGTATGAACCTTTAGCACGGATGTTGTGGATGTGG 620403 Query 23621 AAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATG 23680 | ||| || || || | | ||| || || || || |||| |||||||||||| Sbjct 620404 AGACCGATACCACCAGCAGTTTTAGAGATTTGAGCACAAATCTTCAAAGTGTCGTAGATA 620463 Query 23681 CCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGC 23740 || || ||| || | || || | |||||| || |||||||| || | || Sbjct 620464 CCGTCAATGGAATCTGAAGCCATGGCAACGAGGAAACATGACGACATTTGAGCGTGAGGT 620523 Query 23741 GTAGCGGC----------------------CGAGA---------------ACAGTGTCGG 23763 ||| |||| | ||| || ||| || Sbjct 620524 GTACCGGCGTTGAAAAGCTAAGCATCAGCACAAGATCAACAATTACTAACTCACTGTTGG 620583 Query 23764 GCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAAT 23823 | |||||| || ||||| | | ||||| || ||||| || |||| | || || Sbjct 620584 GGAGGCGTGGGTGAAGTAACGCTCAGACATGAGGTTGTAAGTCTCGAGAACTTTCTCGAT 620643 Query 23824 GTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGT 23883 || | ||||| ||||| | |||||| ||||| ||||||| ||||||||| ||||| | Sbjct 620644 GTTAGCACCGTGGATACCAACGGCGACACGCATAATCATGTGTTGAGGTCTTTCGACGAT 620703 Query 23884 GACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATA 23943 ||||| ||| | | ||||| || || | | || || || || ||||||| || Sbjct 620704 TTTACCGTTGATTCTAAGAAGATAAGATCGCTCAAGGGTCTTGAAACCGAAATAGTTGTA 620763 Query 23944 GTTAAAGTCACGATCGT 23960 || |||||||||| Sbjct 620764 AGCGAAATCACGATCGT 620780 >seq13 Length=1031976 Score = 136 bits (150), Expect = 4e-27 Identities = 227/320 (71%), Gaps = 6/320 (2%) Strand=Plus/Plus Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 |||||| | ||||| |||| || || || ||||| || || ||| | || ||| | | Sbjct 741802 GAAAACATTCATTCTGAAACCTACTCCCTTCTCATTGACACCTACATCAAAGACCCAGCC 741861 Query 57867 -GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGA 57925 | || || || ||| | || ||||| || || || |||||||| ||||| || Sbjct 741862 CGTCGTACCTAC-CTTTTCGAAGCCATCGACACCATCCCATGTATCGCCAAAAAGGCTGA 741920 Query 57926 GTGGTCAATCAAATGGATAAAAAGCGCCACGGCCA-CGTTCGCCGAGAGGCTAATCGCGT 57984 ||| | |||||||||| | || ||| || | ||||||||||| | ||||| | Sbjct 741921 TTGGGCTCTCAAATGGATCTCAGACGA-ACGATCAACATTCGCCGAGAGATTGATCGCCT 741979 Query 57985 TCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAATATTTTGGATGAAG 58043 ||||||| ||||||||||| |||||||| || | |||| || | || || ||| | ||| Sbjct 741980 TCGCCGCTGTCGAAGGTATCTTCTTTTCAGG-ATCTTTCGCTTCCATCTTCTGGCTCAAG 742038 Query 58044 AAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 ||||| || ||||||| || |||| || |||||| | || || || || || ||| Sbjct 742039 AAACGTGGTTTGATGCCAGGATTGACTTTCTCCAACGAACTCATCTCCCGTGATGAAGGT 742098 Query 58104 CTCCATACTGATTTTGCGTG 58123 || || |||||||| || || Sbjct 742099 CTTCACACTGATTTCGCTTG 742118 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || || || || || || |||||| |||| |||||| | || Sbjct 993420 ATGCAAATTTTCGTCAAAACCCTCACCGGAAAGACTATCACCCTCGAAGTTGAATCATCT 993479 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| | ||||| | ||| ||||| || || | || || ||||| Sbjct 993480 GATACTATCGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAA 993539 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || |||||||| ||||| |||||||| || ||| | ||||| ||| Sbjct 993540 CAGAGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTAGAACTTTATCGGATTACAAC 993599 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| ||||||||| |||| ||| | || || || |||| Sbjct 993600 ATCCAAAAGGAATCAACTCTTCATTTGGTCCTTCGTCTCAGAGGTGGTA 993648 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || ||||| || || ||||| |||||| | || || ||| | || Sbjct 992964 ATGCAAATCTTTGTTAAAACTCTTACTGGTAAAACTATCACCCTTGAAGTCGAATCTTCA 993023 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || |||| | || | ||| | ||||||||||| | || || ||||| Sbjct 993024 GACACCATTGATAACGTTAAATCCAAGA-TCCAAGACAAGGAAGGAATTCCACCAGACCA 993082 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || |||||||| ||||| || || || | || | |||||| || Sbjct 993083 ACAGCGTTTGATTTTCGCTGGTAAACAATTAGAGGATGGTCGTACACTCTCCGATTACAA 993142 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||||||||| || || || |||| || ||| | | || |||| Sbjct 993143 CATTCAAAAAGAATCCACCCTCCACTTGGTTCTCAGATTACGTGGTGGTA 993192 Score = 100 bits (110), Expect = 3e-16 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || ||||| || || ||||| ||||| | || |||||| | ||| Sbjct 993192 ATGCAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCC 993251 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | || | ||| | ||||| || || | || || || || Sbjct 993252 GACACCATCGACAACGTTAAATCCAAGA-TCCAAGACAAAGAGGGTATCCCACCAGATCA 993310 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGATTAT 31369 || | | || ||||| || ||||| || || ||| || ||| | || | || Sbjct 993311 ACAAAGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAG--ACTAC 993368 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||||||||||| || |||||| |||| |||||| | | || |||| Sbjct 993369 AACATTCAAAAAGAATCAACCCTTCATTTGGTTCTTAGATTACGTGGTGGTA 993420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766232837600