Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq8 147 3e-30 seq13 114 2e-20 seq5 87.8 2e-12 >seq8 Length=1407489 Score = 147 bits (162), Expect = 3e-30 Identities = 755/1195 (63%), Gaps = 73/1195 (6%) Strand=Plus/Plus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| ||| || |||||||| || || || |||| | | | |||| || || ||| Sbjct 619804 GCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGGGGCAGAGTATTCGATGATTTCA 619863 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 || || | ||||| ||||||| || || | || ||| || || || ||| Sbjct 619864 GTACACAAGTTACTTGACTTGATTGTACCAAGATGTTGGTGGTTGGATTTGGAGTTGGCA 619923 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 || ||||| ||||| ||||| || | ||||| || | |||| ||| | ||| || | Sbjct 619924 GCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATAGCGAAC 619983 Query 63123 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTT-----CTCTTTCGTATAGAG 63177 || | | |||| || || | ||| || ||||| || | |||||| || Sbjct 619984 CAAAGTTTTTGAGCTTTGATGGTC--TTTCTA---CCTTTACCAGCTTTCTCGTAT-GAT 620037 Query 63178 TATACAA--TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGG 63235 | || ||| |||||| || ||||| | | | | ||||||||| | || Sbjct 620038 TCGTAAAGCTCGA-CGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACATTCAGCTGG 620096 Query 63236 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63295 |||||| | | ||| ||||| || | | || || ||||| || |||||||| ||||| Sbjct 620097 ACACATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCCA 620156 Query 63296 AAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63355 ||||| || | ||| | | || | ||| || || || ||| || ||||| Sbjct 620157 GAGAGCGTAGAACAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTACGGAGATC 620216 Query 63356 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63415 |||||| | | || ||| | ||||| ||||| | ||| || || | | | || || | Sbjct 620217 GAGGAAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGATAGCGAAAGCACCTGGTCT 620276 Query 63416 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63475 ||||| || || || || | |||||| ||||| | || |||| | |||||||| Sbjct 620277 CTTGTTACCACCTTGGTCGACGTATCTGGCGGTAGCGTCGAAAGCTCTAAGCATTGGAAC 620336 Query 63476 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACT 63535 |||||||| || ||| |||||||||| || || || | ||||| || || Sbjct 620337 GATACCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAACCTTTAGCACGGATGTTGTG 620396 Query 63536 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63595 || ||||| || || || || ||||||||||| || || || || ||||| Sbjct 620397 GATGTGGAGACCGATACCACCAGCAGTTTTAGAGATTTGAGCACAAATCTTCAAAGTGTC 620456 Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG--- 63652 ||||| || || ||| ||| |||| || || ||||| |||||||| Sbjct 620457 GTAGATACCGTCAATGGAATCTGAAGCCATGGCAACGAGGAAACATGACGACATTTGAGC 620516 Query 63653 GTGACGAGTAGTTCCCGCATTAAA----TAAG---------------------------- 63680 |||| | ||| || || || || |||| Sbjct 620517 GTGAGGTGTA---CCGGCGTTGAAAAGCTAAGCATCAGCACAAGATCAACAATTACTAAC 620573 Query 63681 -----GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63735 || || || ||||| || || | ||||| | || ||||| ||||| | | Sbjct 620574 TCACTGTTGGGGAGGCGTGGGTGAAGTAACGCTCAGACATGAGGTTGTAAGTCTCGAGAA 620633 Query 63736 CTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 63794 || || || | || | || || || || ||||||||||| | |||||| |||||| Sbjct 620634 CTTTCTCGATGTTAGCACCG-TGGATACCAACGGCGACACGCATAATCATGTGTTGAGGT 620692 Query 63795 CTTTCAACAATTTTGTTGTTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACC 63853 ||||| || ||||| ||| ||| | || ||| || ||| || | || || ||||| Sbjct 620693 CTTTCGACGATTTTACCGTTGATTCT-AAGAAGATAAGATCGCTCAAGGGTCTTGAAACC 620751 Query 63854 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATA 63913 ||||||||||| | || || || ||||| || ||| | |||| ||| | | | Sbjct 620752 GAAATAGTTGTAAGCGAAATCACGATCGTAGATGATAGCAGAATCGAG---AAC---GTC 620805 Query 63914 TTTGTTAACTAT-AT-CCATGGTAA--TACTT--GAAATAATCGGAGAATGTTTCCCATT 63967 |||||| | || || | | |||| ||| | ||| || |||| | ||| || | Sbjct 620806 TTTGTTCTCCATGATGACGTTGTAAACGTCTTCCGCAATCATTGGAGCGTTTTTACCGGT 620865 Query 63968 TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 64027 || || ||||| ||| ||| | ||| | || | || |||||| || || Sbjct 620866 CTTTGGGTTAACCCAGTGGAAAAGATCGGAAACGACGGCTGAGAAAGATTTTTTGGTCTC 620925 Query 64028 CTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64082 ||||| |||||||| || || || | || || |||||||| ||||| |||||| Sbjct 620926 TTTGTGAAGATTTGAGATAGCGATACGTGCAGCGAGAATGGCGTAATCAGGATGT 620980 >seq13 Length=1031976 Score = 114 bits (126), Expect = 2e-20 Identities = 187/267 (70%), Gaps = 3/267 (1%) Strand=Plus/Minus Query 33564 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623 ||||| | || | |||||| |||||||| ||| ||||| || || | || | | Sbjct 742136 AAATGAGTGAAGAGCAAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGAGT 742077 Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683 ||||| || || || | ||| ||||| | ||||| || || ||||| || ||||||||| Sbjct 742076 TCGTTGGAGAAAGTCAATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAGCG 742017 Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--AT 33741 || ||||| ||||||||||| ||||| || || || ||||| || | |||||| | || Sbjct 742016 AAAGATCCTGAAAAGAAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTCGGCGAAT 741957 Query 33742 AACCGGCGCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33800 || | ||| ||||| || |||||||||| ||||| || | ||| || Sbjct 741956 GTTGATCGTTCGTCTGAGATCCATTTGAGAGCCCAATCAGCCTTTTTGGCGATACATGGG 741897 Query 33801 ATCGTTTCTATGGCATTAAAGAGATAG 33827 || || || ||||| | || || ||| Sbjct 741896 ATGGTGTCGATGGCTTCGAAAAGGTAG 741870 >seq5 Length=1604251 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 33603 CCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 33662 ||||| |||||||| || || ||||| |||||||| | || ||||| | || | ||| Sbjct 1486538 CCCTCATCTCTACTGATCAACTCGTTCGAAAACGTTAAACCAGGCATCAAACCTCTCTTC 1486597 Query 33663 TTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33722 || | |||||| || | ||||| || || ||||||||||| ||||| || || || || Sbjct 1486598 TTCAACCAAAAGATAGCTGCGAAAGAACCTGAAAAGAAGATCCCTTCGACAGCTGCGAAA 1486657 Query 33723 GCAATAAG 33730 || || || Sbjct 1486658 GCTATGAG 1486665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817363818400