Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq13 116 4e-21 seq5 105 6e-18 >seq13 Length=1031976 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716 ||||| || |||||| ||||| || ||||| | || |||||||| || || || Sbjct 742121 AAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAAGTC 742062 Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 13776 |||||||||||||| || ||||| || | ||| || || | |||||| ||||| |||||| Sbjct 742061 AATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAGCGAAAGATCCTGAAAAG 742002 Query 13777 AATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTT 13836 || || || || || || || || || || | || || | || | || | || || | Sbjct 742001 AAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTCGGCGAATGTTGATCGTTCGTCT 741942 Query 13837 GATATCCATTTTCTAGCCCATTCAGATTTTTT 13868 || |||||||| |||||| |||| ||||| Sbjct 741941 GAGATCCATTTGAGAGCCCAATCAGCCTTTTT 741910 >seq5 Length=1604251 Score = 105 bits (116), Expect = 6e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 |||||||||||||| || | ||||| ||||| ||||| || |||||||| |||| || Sbjct 1486538 CCCTCATCTCTACTGATCAACTCGTTCGAAAACGTTAAACCAGGCATCAAACCTCTCTTC 1486597 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 || |||||||| || || ||||| || || |||||||| || || || || || || || Sbjct 1486598 TTCAACCAAAAGATAGCTGCGAAAGAACCTGAAAAGAAGATCCCTTCGACAGCTGCGAAA 1486657 Query 13801 GCTATTAGTCG 13811 ||||| || || Sbjct 1486658 GCTATGAGACG 1486668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588620529200