Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8 120 4e-22 seq13 111 2e-19 seq5 91.5 2e-13 >seq8 Length=1407489 Score = 120 bits (132), Expect = 4e-22 Identities = 432/671 (64%), Gaps = 6/671 (1%) Strand=Plus/Plus Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757 |||| ||| || ||||||||||| || || |||| | | | |||| || |||||| Sbjct 619804 GCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGGGGCAGAGTATTCGATGATTTCA 619863 Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817 || || | ||||| ||||||| || || | || ||| || || || ||| Sbjct 619864 GTACACAAGTTACTTGACTTGATTGTACCAAGATGTTGGTGGTTGGATTTGGAGTTGGCA 619923 Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877 || ||||| ||||| || || || | ||||| || | |||| ||| | ||| || | Sbjct 619924 GCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATAGCGAAC 619983 Query 71878 CAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTC--GTATTGTGTAT 71935 || | | |||| || || | || | || || | ||||| |||| | | Sbjct 619984 CAAAGTTTTTGAGCTTTGATGGTCTT--TCTACCTTTACCAGCTTTCTCGTATGATTCGT 620041 Query 71936 ATAA-TCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACAC 71994 | | ||| |||||| || | ||| | | | || ||||||||| |||||| Sbjct 620042 AAAGCTCGA-CGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACATTCAGCTGGACAC 620100 Query 71995 ATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 72054 || | | ||| |||||||| | | || || ||||| || |||||||| ||||| ||| Sbjct 620101 ATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCCAGAGA 620160 Query 72055 GCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 72114 || || | ||| | | || | || || || || ||| || ||||||||| Sbjct 620161 GCGTAGAACAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTACGGAGATCGAGG 620220 Query 72115 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTG 72174 || | | || ||| | ||||| ||||| | ||| || || | | | || || | ||| Sbjct 620221 AAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGATAGCGAAAGCACCTGGTCTCTTG 620280 Query 72175 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 72234 || || || || || | |||||| ||||| | || |||| | |||||||| ||| Sbjct 620281 TTACCACCTTGGTCGACGTATCTGGCGGTAGCGTCGAAAGCTCTAAGCATTGGAACGATA 620340 Query 72235 CCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATT 72294 || || || ||| ||||| |||| || || || | ||||| || ||| || Sbjct 620341 CCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAACCTTTAGCACGGATGTTGTGGATG 620400 Query 72295 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 72354 ||||| || || || || ||||||||||| || || || || || || ||| Sbjct 620401 TGGAGACCGATACCACCAGCAGTTTTAGAGATTTGAGCACAAATCTTCAAAGTGTCGTAG 620460 Query 72355 ATGCCCTCTAT 72365 || || || || Sbjct 620461 ATACCGTCAAT 620471 >seq13 Length=1031976 Score = 111 bits (122), Expect = 2e-19 Identities = 185/267 (69%), Gaps = 3/267 (1%) Strand=Plus/Minus Query 42047 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAAT 42106 ||||| | || | |||||| |||||||| ||| ||||| ||||| | || | | Sbjct 742136 AAATGAGTGAAGAGCAAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGAGT 742077 Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 |||||||| || || | ||| ||||| | ||||| || || ||||| || || || || Sbjct 742076 TCGTTGGAGAAAGTCAATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAGCG 742017 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 42226 || ||||| ||||||||||| ||||| || || || ||||| || | |||||| | | Sbjct 742016 AAAGATCCTGAAAAGAAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTCGGCGAAT 741957 Query 42227 CCGGCACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 42283 | | || | | ||||| || |||||||||| ||||| || | ||| || Sbjct 741956 GTTGATCGTTCGTCTGAGATCCATTTGAGAGCCCAATCAGCCTTTTTGGCGATACATGGG 741897 Query 42284 ATCGTTTCTATGGCATTAAAGAGATAG 42310 || || || ||||| | || || ||| Sbjct 741896 ATGGTGTCGATGGCTTCGAAAAGGTAG 741870 >seq5 Length=1604251 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 42086 CCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 42145 |||||||||||||| || || ||||| |||||||| | || ||||| | || | ||| Sbjct 1486538 CCCTCATCTCTACTGATCAACTCGTTCGAAAACGTTAAACCAGGCATCAAACCTCTCTTC 1486597 Query 42146 TTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAG 42205 || | |||||| |||| || || || || ||||||||||| ||||| || || || || Sbjct 1486598 TTCAACCAAAAGATAGCTGCGAAAGAACCTGAAAAGAAGATCCCTTCGACAGCTGCGAAA 1486657 Query 42206 GCAATAAG 42213 || || || Sbjct 1486658 GCTATGAG 1486665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138948322800