Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq13 134 3e-26 seq1 116 9e-21 seq5 113 1e-19 seq2 113 1e-19 >seq13 Length=1031976 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||| ||||| || || || || || || | ||| || |||| |||||| ||| Sbjct 993160 GTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTACGACCATCCTCTAATTGTTTACCA 993101 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| | | |||||| || || || |||||||| || || || ||||| | ||| Sbjct 993100 GCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGATTTA 993041 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || || ||| || || || || ||||| ||||||||||| ||| Sbjct 993040 ACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGATAGTTTTACCAGTAAGAGTT 992981 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 992980 TTAACAAAGATTTGCAT 992964 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 ||||| || | ||| | || |||||||| ||||| || ||||| || || || | |||| Sbjct 993406 CTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAGAGTGTACGACCG 993347 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 || |||| |||||| || || ||||| | || |||||||| || || || || ||||| Sbjct 993346 TCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACCCTCTTTG 993287 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 || || ||||| | ||| || || || | ||| ||| | ||| || || | || || Sbjct 993286 TCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAACTTCCAAAGTGATG 993227 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||||||||| ||||| || || || ||||| Sbjct 993226 GTTTTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 127 bits (140), Expect = 5e-24 Identities = 164/226 (73%), Gaps = 3/226 (1%) Strand=Plus/Plus Query 269078 AAAAAATCTGAATGGGCTCTGAAATGGAT---AAACGATAGCGCGCCTTACGGAGAAAGG 269134 ||||| |||| |||||||| |||||||| | |||| | | | | || || || Sbjct 741910 AAAAAGGCTGATTGGGCTCTCAAATGGATCTCAGACGAACGATCAACATTCGCCGAGAGA 741969 Query 269135 TTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTT 269194 || | || || |||||||| |||||||| |||||||| || ||||| || | ||||| Sbjct 741970 TTGATCGCCTTCGCCGCTGTCGAAGGTATCTTCTTTTCAGGATCTTTCGCTTCCATCTTC 742029 Query 269195 TGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGG 269254 ||| | |||||| | || | ||||||||||| |||||||| |||||| | || | | Sbjct 742030 TGGCTCAAGAAACGTGGTTTGATGCCAGGATTGACTTTCTCCAACGAACTCATCTCCCGT 742089 Query 269255 GACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATT 269300 || |||||| | ||| || ||||||||||| | || ||| ||| Sbjct 742090 GATGAAGGTCTTCACACTGATTTCGCTTGTTTGCTCTTCACTCATT 742135 Score = 120 bits (132), Expect = 7e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 ||||| || ||||||||||||||||| | |||||| |||||||| || | | |||||| Sbjct 992536 TAGTCTGAAAGAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGA 992477 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 ||||| || || ||||| || || |||||||| | ||| ||||| || | ||| || Sbjct 992476 TCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAG 992417 Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 | ||| ||||| ||||| || || ||||| || ||| Sbjct 992416 GATTCAACCTCGAGTGTGATGGTTTTACCCGTGAGT 992381 Score = 105 bits (116), Expect = 2e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 104356 ATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTG 104415 ||| | |||||| || || || ||||| || ||||| | |||||||| ||||| | || Sbjct 993906 ATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGACAAGGTTCTACCATCTTCCAACTG 993847 Query 104416 TTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 ||| || ||||| || || || ||||| || || || || ||||||||||| || || || Sbjct 993846 TTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGGATACCTTCTTTATCTTGGATTTT 993787 Query 104476 TGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 | ||| || || || | ||||| | ||| || || || || || || ||||| || Sbjct 993786 GGATTTAACGTTATCGATAGTATCAGAGGATTCGACTTCGAGGGTGATGGTTTTACCGGT 993727 Query 104536 AAG 104538 ||| Sbjct 993726 AAG 993724 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 || || || ||||| | |||||||| |||||||| || || ||||| | | ||||| Sbjct 992861 TAATCGGAAAGAGTACGGCCGTCTTCGAGTTGTTTACCGGCGAAAATCAAACGTTGTTGG 992802 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 || || || ||||||||||| || || ||||| | || || || || | ||| || | Sbjct 992801 TCTGGTGGGATTCCTTCTTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCTGAA 992742 Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAG 104538 | || ||||| || || || || |||||||| || Sbjct 992741 GACTCGACCTCAAGGGTGATGGTTTTACCAGTGAG 992707 >seq1 Length=2409791 Score = 116 bits (128), Expect = 9e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 ||||| || | ||| | |||||||| || || || || || || || |||||||||||| Sbjct 586116 CTAAGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACCG 586175 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 ||||| | |||||| ||||| || || | | ||||| || || || || ||||||||| Sbjct 586176 TCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTA 586235 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 || || || || | ||| || || || | ||| ||| | || ||||| || || || Sbjct 586236 TCTTGGATTTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGAGGGTGATG 586295 Query 104525 GTCTTACCAGTAAG 104538 || ||||| ||||| Sbjct 586296 GTTTTACCCGTAAG 586309 >seq5 Length=1604251 Score = 113 bits (124), Expect = 1e-19 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 269141 GCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTG 269200 ||||| || ||||| ||||| || |||||||| || ||||| || ||||||||||||||| Sbjct 1486659 GCTTTCGCAGCTGTCGAAGGGATCTTCTTTTCAGGTTCTTTCGCAGCTATCTTTTGGTTG 1486600 Query 269201 AAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAA 269260 ||||| ||||| | ||||| || ||||| || || ||||| ||||| || || || || Sbjct 1486599 AAGAAGAGAGGTTTGATGCCTGGTTTAACGTTTTCGAACGAGTTGATCAGTAGAGATGAG 1486540 Query 269261 GG 269262 || Sbjct 1486539 GG 1486538 >seq2 Length=2299803 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 |||||||| || ||||| || ||||| | |||||| ||||| ||||||| | ||||| Sbjct 838529 TAGTCAGAAAGTGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATTAATCGTTGTTGG 838588 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 || || || |||||||||||||| || ||||| | ||| || || || | ||| ||| Sbjct 838589 TCTGGTGGGATTCCTTCTTTATCTTGGATCTTGGATTTGACGTTGTCGATGGTGTCGGAT 838648 Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAG 104538 | ||| ||||| || ||||| ||||| || || || Sbjct 838649 GATTCGACCTCGAGAGTAATGGTCTTTCCCGTGAG 838683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397957431240