Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq13 111 1e-19 >seq13 Length=1031976 Score = 111 bits (122), Expect = 1e-19 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || ||||| | || | ||||| || | ||| ||||||||||| | | Sbjct 993658 AAAATTTGCATACCACCTCTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATG 993599 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || ||||| | ||| | ||| |||| ||||| || | ||||| ||||| || Sbjct 993598 TTGTAATCCGATAAAGTTCTACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGT 993539 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || ||||| || ||||| |||||||| | |||||| | |||||| | ||| ||| ||| Sbjct 993538 TGGTCTGGTGGGATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCA 993479 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | ||||| || ||||| || || ||||| || || || ||||| Sbjct 993478 GATGATTCAACTTCGAGGGTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 109 bits (120), Expect = 5e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 ||||| || | || ||||| ||||| | ||| || || | | ||||| || |||| Sbjct 993400 ACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTC--TGAGAGTGTACGACCGTCCT 993343 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | | ||||| ||| | || || |||||||| |||||||| || ||||| |||||||| | Sbjct 993342 CTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACCCTCTTTGTCTT 993283 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | || ||| | ||| ||||| | || || || | |||||||||| Sbjct 993282 GGATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAACTTCCAAAGTGATGGTTT 993223 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | |||||||||||||| || ||||| ||||| Sbjct 993222 TACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 || || ||||| || | ||||| |||||||| | || ||||| || || | | Sbjct 993917 CGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGACAAGGTTCTACCA 993858 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| |||||| ||| ||||||| | |||||| || ||||| || ||||||||||| Sbjct 993857 TCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGGATACCTTCTTTA 993798 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| | || ||| ||| ||| |||| | ||||| || | |||||| Sbjct 993797 TCTTGGATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGACTTCGAGGGTGATG 993738 Query 94973 GTTTTTCCAGTAAGA 94987 ||||| || |||||| Sbjct 993737 GTTTTACCGGTAAGA 993723 Score = 100 bits (110), Expect = 3e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | || ||||| ||||| | ||| |||||| | ||||| || ||||| Sbjct 993172 ACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGG--AGAGTGTACGACCATCCT 993115 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | | ||||| || | || || || | || || ||||| ||||| ||||| ||||| | Sbjct 993114 CTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTT 993055 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | || ||| | | ||||| | ||||| |||| ||||| |||| Sbjct 993054 GGATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGATAGTTT 992995 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | |||||||||||||| |||||||| ||||| Sbjct 992994 TACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291031890800