Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq8 147 3e-30 seq13 123 3e-23 seq5 82.4 1e-10 >seq8 Length=1407489 Score = 147 bits (162), Expect = 3e-30 Identities = 440/675 (65%), Gaps = 12/675 (2%) Strand=Plus/Plus Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951 |||| ||| || ||||||||||| || || |||| | | | |||| || || ||| Sbjct 619804 GCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGGGGCAGAGTATTCGATGATTTCA 619863 Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011 || || | ||||| ||||||| || || | || ||| || || || ||| Sbjct 619864 GTACACAAGTTACTTGACTTGATTGTACCAAGATGTTGGTGGTTGGATTTGGAGTTGGCA 619923 Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071 || ||||| ||||| ||||| || | ||||| || | |||| ||| | ||| || | Sbjct 619924 GCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATAGCGAAC 619983 Query 63072 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTT-----CTCTTTCGTATAGTG 63126 || | | |||| || || | ||| || ||||| || | |||||| | Sbjct 619984 CAAAGTTTTTGAGCTTTGATGGTC--TTTCTA---CCTTTACCAGCTTTCTCGTATGATT 620038 Query 63127 TATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 63185 || | ||| |||||| || ||||| | | | || ||||||||| | ||| Sbjct 620039 CGTAAAGCTCGA-CGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACATTCAGCTGGA 620097 Query 63186 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63245 ||||| | | ||| ||||| || | | || || ||||| || |||||||| ||||| Sbjct 620098 CACATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCCAG 620157 Query 63246 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63305 ||||| || | ||| | | || | ||| || || || ||| || |||||| Sbjct 620158 AGAGCGTAGAACAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTACGGAGATCG 620217 Query 63306 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63365 ||||| | | || ||| | ||||| ||||| | ||| || || | | | || || | Sbjct 620218 AGGAAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGATAGCGAAAGCACCTGGTCTC 620277 Query 63366 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63425 ||||| || || || || | |||||| ||||| | || |||| | |||||||| Sbjct 620278 TTGTTACCACCTTGGTCGACGTATCTGGCGGTAGCGTCGAAAGCTCTAAGCATTGGAACG 620337 Query 63426 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTA 63485 |||||||| || ||| |||||||||| || || || | ||||| || || Sbjct 620338 ATACCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAACCTTTAGCACGGATGTTGTGG 620397 Query 63486 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCA 63545 || ||||| || || || || ||||||||||| || || || || ||||| Sbjct 620398 ATGTGGAGACCGATACCACCAGCAGTTTTAGAGATTTGAGCACAAATCTTCAAAGTGTCG 620457 Query 63546 TAGATACCCTCTATG 63560 |||||||| || ||| Sbjct 620458 TAGATACCGTCAATG 620472 Score = 84.2 bits (92), Expect = 3e-11 Identities = 222/334 (66%), Gaps = 14/334 (4%) Strand=Plus/Plus Query 63705 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63764 || || || || ||||||||||| | |||||| ||||||||||| ||||| || ||| Sbjct 620654 TGGATACCAACGGCGACACGCATAATCATGTGTTGAGGTCTTTCGACGATTTTACCGTTG 620713 Query 63765 ATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63823 ||| | || ||| || ||| || | || || ||||| ||||||||||| | || || Sbjct 620714 ATTCT-AAGAAGATAAGATCGCTCAAGGGTCTTGAAACCGAAATAGTTGTAAGCGAAATC 620772 Query 63824 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 63883 || ||||| || ||| | || | ||| | | | |||||| | || | | | Sbjct 620773 ACGATCGTAGATGATAGCAGAATCGAG---AAC---GTCTTTGTTCTCCATGATGACGTT 620826 Query 63884 G-ATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 63937 | | || | | ||| || |||| | ||| || | || || ||||| ||| ||| Sbjct 620827 GTAAACGTCTTCCGCAATCATTGGAGCGTTTTTACCGGTCTTTGGGTTAACCCAGTGGAA 620886 Query 63938 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGC 63997 | ||| | || | || |||||| || || ||||| |||||||| | || Sbjct 620887 AAGATCGGAAACGACGGCTGAGAAAGATTTTTTGGTCTCTTTGTGAAGATTTGAGATAGC 620946 Query 63998 TATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64031 || | || || |||||||| ||||| |||||| Sbjct 620947 GATACGTGCAGCGAGAATGGCGTAATCAGGATGT 620980 >seq13 Length=1031976 Score = 123 bits (136), Expect = 3e-23 Identities = 189/267 (71%), Gaps = 3/267 (1%) Strand=Plus/Minus Query 33286 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 33345 ||||| | || | |||||| |||||||| ||| ||||| || || | || ||| Sbjct 742136 AAATGAGTGAAGAGCAAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGAGT 742077 Query 33346 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33405 |||||||| || || | ||| ||||| | ||||| || || ||||| || ||||||||| Sbjct 742076 TCGTTGGAGAAAGTCAATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAGCG 742017 Query 33406 AATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--AT 33463 || ||||| ||||||||||| ||||| || || || ||||| || | |||||| | || Sbjct 742016 AAAGATCCTGAAAAGAAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTCGGCGAAT 741957 Query 33464 AACCGGCGCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33522 || | ||| ||||| || |||||||||| ||||| || | ||| || Sbjct 741956 GTTGATCGTTCGTCTGAGATCCATTTGAGAGCCCAATCAGCCTTTTTGGCGATACATGGG 741897 Query 33523 ATCGTTTCTATGGCATTAAAGAGATAG 33549 || || || ||||| | || || ||| Sbjct 741896 ATGGTGTCGATGGCTTCGAAAAGGTAG 741870 >seq5 Length=1604251 Score = 82.4 bits (90), Expect = 1e-10 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 33325 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 33384 ||||| |||||||| || | ||||| |||||||| | || ||||| | || | ||| Sbjct 1486538 CCCTCATCTCTACTGATCAACTCGTTCGAAAACGTTAAACCAGGCATCAAACCTCTCTTC 1486597 Query 33385 TTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33444 || | |||||| || | ||||| || || ||||||||||| ||||| || || || || Sbjct 1486598 TTCAACCAAAAGATAGCTGCGAAAGAACCTGAAAAGAAGATCCCTTCGACAGCTGCGAAA 1486657 Query 33445 GCAATAAG 33452 || || || Sbjct 1486658 GCTATGAG 1486665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946966394800