Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 1e-14 seq1 84.2 2e-11 >seq13 Length=1031976 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || || | || || || || | ||| || || |||||||||||||||||| Sbjct 993190 CCACCACGTAATCTGAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAG 993131 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||||| || || || ||| | || |||||||| ||||| || || Sbjct 993130 AGTGTACGACCATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGA 993071 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || || | | || | || || | || |||| Sbjct 993070 ATTCCTTCCTTGTCTTGGATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACT 993011 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||||| || |||||||| || || || ||||| Sbjct 993010 TCAAGGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAAT-CGCT 131066 ||||| | | ||| || || ||||| | || || |||||||| |||||||||| || | Sbjct 993646 CCACCTCTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGAT 993587 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | | | | || || | || || || ||| |||| || | ||| ||||| || || Sbjct 993586 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGG 993528 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || |||||||| ||||| ||||| | || | |||||| | || || | Sbjct 993527 GATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCAAC 993468 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || ||||| || ||||| |||||||| ||||| Sbjct 993467 TTCGAGGGTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| | || ||||| | || ||||||||||| || |||||||| | Sbjct 993929 CCACCACGTAGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGAC 993870 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | || || | ||| || || || |||| | | || ||||| || ||| Sbjct 993869 AAGGTTCTACCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGG 993810 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || |||||| || | | || | |||||| | ||| |||| Sbjct 993809 ATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGACT 993750 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGA 131214 |||| ||| | |||||||||||| ||| Sbjct 993749 TCGAGGGTGATGGTTTTACCGGTAAGA 993723 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || || | || || ||||| | ||| || || |||||||||||||| | || Sbjct 993418 CCACCACGTAATCTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGT--CTG 993361 Query 131068 ATGGTGCGCGA--GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||| ||| |||||||| || || || ||| | || || | || || || || | Sbjct 993360 AGAGTGTACGACCGTCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTG 993301 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || |||||||| ||| || || | | || | || |||| || || | Sbjct 993300 GGATACCCTCTTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAA 993241 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||||||| || |||||||| ||||| || ||||| Sbjct 993240 CTTCCAAAGTGATGGTTTTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 >seq1 Length=2409791 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || || | || || ||||| | ||| || |||||||| ||||||||||| Sbjct 586104 CCACCACGTAATCTAAGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAA 586163 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || | || || || ||| |||| ||||| || ||||| || ||| Sbjct 586164 AGAGTTCTACCGTCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGG 586223 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || |||||| || | | || | || |||| ||||| | Sbjct 586224 ATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAACC 586283 Query 131188 TCGACGGTAACGGTTTTACCGGTTAG 131213 |||| ||| | ||||||||| || || Sbjct 586284 TCGAGGGTGATGGTTTTACCCGTAAG 586309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012622995200