Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq13 116 2e-21 >seq13 Length=1031976 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | ||| | |||||||||||||| |||||||| || |||||||| | Sbjct 993648 TACCACCTCTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCG 993589 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | ||| | | || || |||||||| || || || || | | ||||| || | | Sbjct 993588 ATAAAGTTCTACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTG 993529 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || |||||||| |||||| ||| ||||| | || |||||| ||||| Sbjct 993528 GGATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCAA 993469 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || ||||| || || || | |||||| ||||| || ||||| Sbjct 993468 CTTCGAGGGTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| || ||||||||||| || ||||||||| ||||||||||||||| Sbjct 993929 CCACCACGTAGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGAC 993870 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || | | || || || ||||| |||||||| || || | |||||| || | |||| Sbjct 993869 AAGGTTCTACCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGG 993810 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||||| || ||||| || || || | || |||||| ||| ||| Sbjct 993809 ATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGACT 993750 Query 38271 TCTAATGTAATAGTTTTACCCGT 38293 || | || || |||||||| || Sbjct 993749 TCGAGGGTGATGGTTTTACCGGT 993727 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||||||||| || || |||||||| ||||| || || | ||| |||| ||| Sbjct 993400 ACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAGAGTGTACGACCGTCCTCT 993341 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 |||||||| ||||| || || | | ||||||||| | |||| || |||||||| Sbjct 993340 AATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACCCTCTTTGTCTTGG 993281 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || || || || | || || || ||||||||| || || || |||||| Sbjct 993280 ATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAACTTCCAAAGTGATGGTTTTA 993221 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | ||||| ||||| || ||||| Sbjct 993220 CCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947077534930