Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8 125 9e-24 >seq8 Length=1407489 Score = 125 bits (138), Expect = 9e-24 Identities = 433/671 (65%), Gaps = 6/671 (1%) Strand=Plus/Plus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| ||| || ||||||||||| || || |||| | | | |||| || || ||| Sbjct 619804 GCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGGGGCAGAGTATTCGATGATTTCA 619863 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 || || | ||||| ||||||| || || | || ||| || || || ||| Sbjct 619864 GTACACAAGTTACTTGACTTGATTGTACCAAGATGTTGGTGGTTGGATTTGGAGTTGGCA 619923 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 || ||||| ||||| ||||| || | ||||| || | |||| ||| | ||| || | Sbjct 619924 GCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATAGCGAAC 619983 Query 62927 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTC--GTATAGTGTAT 62984 || | | |||| || || | ||| || || | ||||| |||| | | Sbjct 619984 CAAAGTTTTTGAGCTTTGATGGTC--TTTCTACCTTTACCAGCTTTCTCGTATGATTCGT 620041 Query 62985 ACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACAC 63043 | | ||| |||||| || ||||| | | || || ||||||||| | |||||| Sbjct 620042 AAAGCTCGA-CGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACATTCAGCTGGACAC 620100 Query 63044 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63103 || | | ||| ||||| || | | || || ||||| || |||||||| ||||| ||| Sbjct 620101 ATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCCAGAGA 620160 Query 63104 GCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63163 || || | ||| | | || | ||| || || || ||| || ||||||||| Sbjct 620161 GCGTAGAACAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTACGGAGATCGAGG 620220 Query 63164 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63223 || | | || ||| | ||||| ||||| | ||| || || | | | || || | ||| Sbjct 620221 AAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGATAGCGAAAGCACCTGGTCTCTTG 620280 Query 63224 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63283 || || || || || | |||||| ||||| | || |||| | |||||||| ||| Sbjct 620281 TTACCACCTTGGTCGACGTATCTGGCGGTAGCGTCGAAAGCTCTAAGCATTGGAACGATA 620340 Query 63284 CCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATT 63343 || || || ||| ||||| || | || || || | ||||| || || || Sbjct 620341 CCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAACCTTTAGCACGGATGTTGTGGATG 620400 Query 63344 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 63403 ||||| || || || || ||||||||||| || || || || || || ||| Sbjct 620401 TGGAGACCGATACCACCAGCAGTTTTAGAGATTTGAGCACAAATCTTCAAAGTGTCGTAG 620460 Query 63404 ATGCCCTCTAT 63414 || || || || Sbjct 620461 ATACCGTCAAT 620471 Score = 82.4 bits (90), Expect = 1e-10 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 63560 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63619 || || || || ||||||||||| | |||||| ||||||||||| ||||| || ||| Sbjct 620654 TGGATACCAACGGCGACACGCATAATCATGTGTTGAGGTCTTTCGACGATTTTACCGTTG 620713 Query 63620 ATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63678 ||| | || ||| || ||| || | || || ||||| ||||||||||| | || || Sbjct 620714 ATTCT-AAGAAGATAAGATCGCTCAAGGGTCTTGAAACCGAAATAGTTGTAAGCGAAATC 620772 Query 63679 TCGTTCGTAAATAATAACCGAGTTGAG 63705 || ||||| || ||| | || | ||| Sbjct 620773 ACGATCGTAGATGATAGCAGAATCGAG 620799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631762388000