Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq13 143 2e-29 >seq13 Length=1031976 Score = 143 bits (158), Expect = 2e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||| | || |||||| | ||||| | ||||| || || || Sbjct 992964 ATGCAAATCTTTGTTAAAACTCTTACTGGTAAAACTATCACCCTTGAAGTCGAATCTTCA 993023 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || | || || ||| ||||| ||||| |||||||| ||||| Sbjct 993024 GACACCATTGA-TAACGTTAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCA 993082 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | ||||| || || ||||||||||| |||| ||| || | ||||||||| Sbjct 993083 ACAGCGTTTGATTTTCGCTGGTAAACAATTAGAGGATGGTCGTACACTCTCCGATTACAA 993142 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 ||||||||||||||||| || || || || || || Sbjct 993143 CATTCAAAAAGAATCCACCCTCCACTTGGTTCTCAG 993178 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCAC-TGAAGCA 25081 ||||||||| ||||||| ||||||| || || ||||| |||||||| | || | || Sbjct 993727 ACCGGTAAAACCATCACCCTCGAAGTCGAATCCTCTGATACTATCGA-TAACGTTAAATC 993785 Query 25082 AAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAA 25141 |||||| || |||||||| || || || |||||||| | | || |||||||| || Sbjct 993786 CAAAATCCAAGATAAAGAAGGTATCCCCCCAGACCAACAAAGACTCATCTTTGCCGGTAA 993845 Query 25142 ACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 ||| || ||||||| | | || || ||||||||||| ||||| || || || || || Sbjct 993846 ACAGTTGGAAGATGGTAGAACCTTGTCTGATTACAATATCCAAAAGGAGTCTACACTTCA 993905 Query 25202 TTTAGTGCTAAGGCTAAGAGGAGGA 25226 ||| || || | ||| | || ||| Sbjct 993906 TTTGGTTTTACGTCTACGTGGTGGA 993930 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | || |||||| ||||||| | ||||| || || || Sbjct 993192 ATGCAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCC 993251 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | || || ||| |||||||| || || ||||| || ||| Sbjct 993252 GACACCATCGACAACGTTAAATCCAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 993311 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | ||||| ||||| ||||||||||| || | ||| || | || ||||| Sbjct 993312 CAAAGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAAC 993371 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 |||||||||||||| || || ||||| || || || Sbjct 993372 ATTCAAAAAGAATCAACCCTTCATTTGGTTCTTAG 993406 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAA 25082 || |||||| ||||||| | || || ||||| || ||||| || || | ||| Sbjct 992710 ACTGGTAAAACCATCACCCTTGAGGTCGAGTCTTCAGACACCATTGACAACGTCAAGTCT 992769 Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142 || ||| ||||||||||| || ||||| |||||||| || | ||||| ||||| ||| Sbjct 992770 AAGATCCAAGACAAAGAAGGAATCCCACCAGACCAACAACGTTTGATTTTCGCCGGTAAA 992829 Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATA 25179 ||| | ||||| | || ||| | |||||||| || Sbjct 992830 CAACTCGAAGACGGCCGTACTCTTTCCGATTACAGTA 992866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327841564450