Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq13 172 5e-38 seq1 98.7 8e-16 >seq13 Length=1031976 Score = 172 bits (190), Expect = 5e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||||||| | || |||||||| |||| |||||||| ||| | | Sbjct 992964 ATGCAAATCTTTGTTAAAACTCTTACTGGTAAAACTATCACCCTTGAAGTCGAATCTTCA 993023 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | ||| || || ||||||||||| || |||||||| || ||| Sbjct 993024 GACACCATTGATAACGTTAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAA 993083 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || || ||||| ||||||||| || || |||||||||||||| Sbjct 993084 CAGCGTTTGATTTTCGCTGGTAAACAATTAGAGGATGGTCGTACACTCTCCGATTACAAC 993143 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||||||||||||| | || || ||| | |||| || || ||| Sbjct 993144 ATTCAAAAAGAATCCACCCTCCACTTGGTTCTCAGATTACGTGGTGGT 993191 Score = 159 bits (176), Expect = 3e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || |||||| | || |||||||| ||||| | ||||| ||| | || Sbjct 993192 ATGCAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCC 993251 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| || || |||||||| |||||||| ||||| |||||| Sbjct 993252 GACACCATCGACAACGTTAAATCCAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 993311 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || ||||| ||||| |||||||| || || |||| || |||||| Sbjct 993312 CAAAGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAAC 993371 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||||||||| ||| | ||||| ||| | |||| || || ||| Sbjct 993372 ATTCAAAAAGAATCAACCCTTCATTTGGTTCTTAGATTACGTGGTGGT 993419 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| | ||||| || || |||| || ||||| ||| | | Sbjct 993420 ATGCAAATTTTCGTCAAAACCCTCACCGGAAAGACTATCACCCTCGAAGTTGAATCATCT 993479 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || |||| |||||||||||||| |||||||| ||||| || ||| Sbjct 993480 GATACTATCGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATCCCACCAGACCAA 993539 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || || || ||||| || || ||| | || | || ||||||||| Sbjct 993540 CAGAGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTAGAACTTTATCGGATTACAAC 993599 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||| ||||| || | ||||| || Sbjct 993600 ATCCAAAAGGAATCAACTCTTCATTTGGT 993628 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||||||||| |||| || ||||| ||| || | ||||| | || | | ||| Sbjct 993727 ACCGGTAAAACCATCACCCTCGAAGTCGAATCCTCTGATACTATCGATAACGTTAAATCC 993786 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| ||||| || || ||||| || || || |||||| | || || |||||||| ||| Sbjct 993787 AAAATCCAAGATAAAGAAGGTATCCCCCCAGACCAACAAAGACTCATCTTTGCCGGTAAA 993846 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||||| || ||| | ||| | || |||||||| || ||||| || || || | ||| Sbjct 993847 CAGTTGGAAGATGGTAGAACCTTGTCTGATTACAATATCCAAAAGGAGTCTACACTTCAT 993906 Query 22423 TTAGTTTTGCG 22433 || ||||| || Sbjct 993907 TTGGTTTTACG 993917 Score = 102 bits (112), Expect = 7e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || |||||||| |||| || || || ||| || | || ||| | ||| || ||||| Sbjct 992385 ACGGGTAAAACCATCACACTCGAGGTTGAATCCTCTGACACCATTGACAATGTCAAATCC 992444 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || |||||||||||||| ||||| ||||| |||||||||||| | || ||||| || ||| Sbjct 992445 AAGATTCAAGACAAGGAAGGTATCCCACCTGATCAACAACGTTTGATCTTTGCTGGTAAA 992504 Query 22363 CAGTTAGAGGA 22373 || || || || Sbjct 992505 CAATTGGAAGA 992515 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 117064 TGATCGCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTT 117123 ||||||| |||||| ||||||||| || ||||||||||| ||| ||| |||| || | Sbjct 741971 TGATCGCCTTCGCCGCTGTCGAAGGTATCTTCTTTTCAGGATCTTTCGCTTCCATCTTCT 742030 Query 117124 TTATCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTG 117183 |||||| ||| | ||||| || | || || ||||||| | || || |||| Sbjct 742031 GGCTCAAGAAACGTGGTTTGATGCCAGGATTGACTTTCTCCAACGAACTCATCTCCCGTG 742090 Query 117184 ACGAAGGTTTACACACCGATTTTGCGTG 117211 | |||||| | ||||| ||||| || || Sbjct 742091 ATGAAGGTCTTCACACTGATTTCGCTTG 742118 >seq1 Length=2409791 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || |||||||| |||| || || || || | |||| ||| | || | | ||| Sbjct 586306 ACGGGTAAAACCATCACCCTCGAGGTTGAGTCATCCGACACCATCGATAACGTTAAATCC 586247 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| ||||| || || ||||| ||||| || ||||||||| | || || || || ||| Sbjct 586246 AAAATCCAAGATAAAGAAGGTATCCCACCAGACCAACAACGTTTGATCTTCGCTGGTAAA 586187 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || || || || | || | || ||||||||||| ||||| ||||| ||| | ||| Sbjct 586186 CAATTGGAAGACGGTAGAACTCTTTCAGATTACAACATCCAAAAGGAATCTACCCTTCAT 586127 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| | |||| || || ||| Sbjct 586126 TTGGTTCTTAGATTACGTGGTGGT 586103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727846536950