Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq13 174 3e-38 seq1 134 3e-26 seq2 123 5e-23 seq9 122 2e-22 >seq13 Length=1031976 Score = 174 bits (192), Expect = 3e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||| |||||||| ||||| |||||||||||||| | ||||| ||| Sbjct 993172 ACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTACGACCATCCTCT 993113 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || ||||| || | | |||||||| |||||||| |||||||||||||| Sbjct 993112 AATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGG 993053 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | || ||| || |||||||||| ||||| ||||| | |||||| ||||| Sbjct 993052 ATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGATAGTTTTA 992993 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || || || || ||||| Sbjct 992992 CCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 174 bits (192), Expect = 3e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || || |||||||| ||||| || || |||||||| | || || ||| Sbjct 993400 ACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAGAGTGTACGACCGTCCTCT 993341 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || |||||||| || | ||||||||| || ||||| || || || |||||||| Sbjct 993340 AATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACCCTCTTTGTCTTGG 993281 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | || ||| ||||||||||| | |||||| |||||||| ||||||||||| Sbjct 993280 ATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAACTTCCAAAGTGATGGTTTTA 993221 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || |||||||| || ||||| Sbjct 993220 CCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || || || ||||||||||| ||||| || | || || |||||||| Sbjct 993628 ACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGATAAAGTTCTACCATCTTCC 993569 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || ||||| || | ||| |||||||| ||||| || || || ||||||||| Sbjct 993568 AATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGGATACCCTCTTTGTCTTGA 993509 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || | |||||| ||||| || || | |||||| ||||| | |||||| || ||| Sbjct 993508 ATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCAACTTCGAGGGTGATAGTCTTT 993449 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||| |||||||| || ||||| Sbjct 993448 CCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || || || || || ||||| || || || ||||| |||||||| || ||||| || Sbjct 993930 TCCACCACGTAGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGA 993871 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 | || || |||||||| ||||| || ||||| || ||||||||||||||||| || || Sbjct 993870 CAAGGTTCTACCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGG 993811 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 || ||||| || ||||| || || | || ||| ||||| || || | ||||| || Sbjct 993810 GATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGAC 993751 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAG 68440 ||| | |||||||||||| || || || Sbjct 993750 TTCGAGGGTGATGGTTTTACCGGTAAG 993724 Score = 120 bits (132), Expect = 6e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 |||||||| || || | || ||||| | || || |||||||| || | | ||||||| Sbjct 992861 TAATCGGAAAGAGTACGGCCGTCTTCGAGTTGTTTACCGGCGAAAATCAAACGTTGTTGG 992802 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || ||||| || ||||| |||||||| ||||| | ||||||| || |||||||||| Sbjct 992801 TCTGGTGGGATTCCTTCTTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGTCTGAA 992742 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || || || || | |||||||||||| || |||||| Sbjct 992741 GACTCGACCTCAAGGGTGATGGTTTTACCAGTGAGG 992706 Score = 104 bits (114), Expect = 4e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || || || || || || || ||||| || || || || || || || | | |||||| Sbjct 992536 TAGTCTGAAAGAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGA 992477 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || ||||| || |||||||||||||||||||| | ||||| || |||||||| | Sbjct 992476 TCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAG 992417 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAG 68440 ||||| || || | ||||||||||| |||||||| Sbjct 992416 GATTCAACCTCGAGTGTGATGGTTTTACCCGTGAG 992382 >seq1 Length=2409791 Score = 134 bits (148), Expect = 3e-26 Identities = 143/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || || || ||||||||||| ||||| || || || || || ||||| Sbjct 586122 ACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACCGTCTTCC 586181 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || ||||| || | | ||||||||| ||||| || ||||| || ||||| Sbjct 586182 AATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGG 586241 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || | || ||| ||||||||||| | ||| || || || | |||||||||||| Sbjct 586242 ATTTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGAGGGTGATGGTTTTA 586301 Query 68433 CCCGTGAGG 68441 ||||| ||| Sbjct 586302 CCCGTAAGG 586310 Score = 86.0 bits (94), Expect = 1e-11 Identities = 214/317 (68%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 225328 CTTCAGGT-CGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTC 225386 ||||| || ||||||| ||| ||||| || | | |||||||| || ||| | Sbjct 321184 CTTCAAGTTCGTAGTAGGATTTGGCCTCTGGAACGTGTTTAACGAAAGCTTCCAAGTTAC 321125 Query 225387 CGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGT 225446 || ||| || ||| ||||| ||| ||| || ||||| | | || ||| | Sbjct 321124 CGGGGTATCTCTTGACCTTGAAGTTGTTCAAGTGGAGAACA-TCGGTGACGGTTCTGT-T 321067 Query 225447 CAAGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGAGG 225505 |||| || | |||||||||||| || |||||||| | ||| || || ||| ||||| Sbjct 321066 CAAGAAATC-AGAGTCGTGGGAGACGATGATGGAGGTACA-GTGGGTGAGGGAGGTGAGG 321009 Query 225506 TGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565 | ||| | ||| | ||||| ||| |||| || || || || || || || || Sbjct 321008 TAGTCGATCAACCAAGTAACGTTCAAGACATCCAAATGATTGGTTGGCTCATCGAGGAGA 320949 Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625 || || ||||| | | |||||| || | | |||| |||||||| ||||| || || Sbjct 320948 AGAATATCAGCCTTGAAGAGGATAGCTCTGGCAAGAGCGAGCTTCATCTTCCAACCACCA 320889 Query 225626 GACAGGGAGCCGATTGA 225642 || ||||| ||||| || Sbjct 320888 GAGAGGGAACCGATAGA 320872 >seq2 Length=2299803 Score = 123 bits (136), Expect = 5e-23 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || || || ||||| || |||||||| || || || || ||||| || | || ||||||| Sbjct 838529 TAGTCAGAAAGTGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATTAATCGTTGTTGG 838588 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || ||||| || ||||| || ||||| ||||| | |||||| ||||||||||| | | Sbjct 838589 TCTGGTGGGATTCCTTCTTTATCTTGGATCTTGGATTTGACGTTGTCGATGGTGTCGGAT 838648 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 ||||| || || | || ||||| |||||||||||| Sbjct 838649 GATTCGACCTCGAGAGTAATGGTCTTTCCCGTGAGG 838684 >seq9 Length=1334013 Score = 122 bits (134), Expect = 2e-22 Identities = 250/364 (69%), Gaps = 6/364 (2%) Strand=Plus/Minus Query 268369 GATTTTTCGGGTCACGAACGTCTCG-CCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGC 268427 |||||||| || ||||| || ||| |||||| || ||||||||||| || || | Sbjct 1262447 GATTTTTCTAGTGACGAATGT-TCGTCCACGTCTTGGAGATTCGTGGTTGAAAAGAATAC 1262389 Query 268428 CGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACA 268487 |||| || | |||||| || |||| || | |||||| || || ||||||| || | | Sbjct 1262388 CGTTACAGGTGAACATACCGTATGATTCTCTGTAGTTGACAACGATCCAGTAGGCGTAAA 1262329 Query 268488 TCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTT-TTGAGGGATT 268546 || ||| |||| ||||| | ||| | ||| || || || ||| |||||| || Sbjct 1262328 GTTTAGCACAACCGTAGGGAGATCTTGGGTAGAATGGAGTGGTT-TCTGATTGAGGAGTT 1262270 Query 268547 TCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTTTC 268605 || ||||| || | || || ||||| || ||||||||||| | || || || Sbjct 1262269 TCAACAACTTTACCGTAAAGTTCAGAGGTTGAAGCTTGGTAGAATCGAACGTG-CTTCTC 1262211 Query 268606 GAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGC 268665 |||||||| ||| ||| || || || | | | ||| || | ||||| || || | Sbjct 1262210 AAGACCGCATGTTCTGATGGCATCAAGAAGTCTCAAAGTACCGAGACCATCGACATCACC 1262151 Query 268666 TGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAAC 268725 || ||||| | ||||||||| || || | |||||| || || |||| ||| || | Sbjct 1262150 AGTGTACTCGGCCATCTCGAAAGAGACTTTGACATGTGATTGAGCACCCAAGTTGTAGAT 1262091 Query 268726 CTCA 268729 |||| Sbjct 1262090 CTCA 1262087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622054391600