Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq8 134 2e-26 seq13 104 3e-17 >seq8 Length=1407489 Score = 134 bits (148), Expect = 2e-26 Identities = 534/828 (64%), Gaps = 23/828 (3%) Strand=Plus/Plus Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTC 114447 || ||||| || ||||| |||||||| ||||| || | | ||||| | ||| | |||| Sbjct 619723 TTCTTGGTAACGACCTTGGTGATTTCGTGAAGTTTCTTGAAATCATACACT-CTCTTCTC 619781 Query 114448 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 114507 | |||| | ||| || || | || || |||||||| |||| | ||||| Sbjct 619782 CATGTCGACAAAGGCAGGGAGAGCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGG 619841 Query 114508 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT---CTTAATGGTGCCCAAGTT 114564 ||| ||| || || ||||| |||||||| || ||| ||| || || || ||| | Sbjct 619842 GGCAGAGTATTCGATGATTTCAGTACACAAGTT---ACTTGACTTGATTGTACC-AAGAT 619897 Query 114565 CTTT-TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCT 114623 || || || || || | ||| || ||||||||||||||| | || | || |||| Sbjct 619898 GTTGGTGGTTGGATTTGGAGTTGGCAGCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCT 619957 Query 114624 CCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTC 114683 | ||||| | | ||||||||| ||| | | ||| | || | || Sbjct 619958 CGGTTTGAGCTTCGAGAATAGCGAACCAAAGTTTTTGAGCTTTGATGGTCTTTCTACCTT 620017 Query 114684 GCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGA 114743 || | | |||||| | ||| || | | |||| |||| | || | | Sbjct 620018 TACCAGCTTTCTCGTATGATTCGTAAAGCTCGACGAACTTTTCAGAGTGAACATCGGCAA 620077 Query 114744 GCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCA 114803 | ||||| | | |||| || | ||| | ||| | ||| | | || |||||||||| Sbjct 620078 GACCTGGACATTCAGCTGGACACATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCA 620137 Query 114804 TGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 114863 |||| || || |||||||||||||| |||| | ||| ||| ||| ||||||| | | Sbjct 620138 TGAAAAGATCAGGGATCCAGAGAGCGTAGAACAAATCACGAGCTCGAACTTCTTCTTTAC 620197 Query 114864 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 114923 | ||||| ||| | || | || || | | ||| |||||||| ||||| ||||| | Sbjct 620198 CGTGATTTTTACGGAGATCGAGGAAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGA 620257 Query 114924 CCGCGATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAA 114980 |||| | ||| | | |||| | |||| || || || || || || | | Sbjct 620258 TAGCGAAAGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTATCTGGCGGTAGCGTCGA 620317 Query 114981 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGA 115038 | | | ||||||||||| |||||| | ||| | || || || || || || || Sbjct 620318 AAGCTCTAAGCATTGGAACGATACCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAAC 620377 Query 115039 CTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 115098 || || || | || | |||||||| | ||| ||||| || || || |||||||| Sbjct 620378 CT--TTAGCACGGATGTTGTGGATGTGGAGACCGATACCACCAGCAGTTTTAGAGATTTG 620435 Query 115099 CGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTC---ACCCTTATTTGCGAT 115155 || || | | | | || ||||||| ||||| || || || | || | || | Sbjct 620436 AGCACAAATCTTCAAAGTGTCGTAGATACCGTCAATGGAATCTGAAGCC---ATGGCAAC 620492 Query 115156 AAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203 ||||| || ||||||||| | |||||||| |||||||| || Sbjct 620493 GAGGAAACATGACGACATTTGAGCGTGAGGTGTACCGGCGTTGAAAAG 620540 >seq13 Length=1031976 Score = 104 bits (114), Expect = 3e-17 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||| || ||||||||||||||||| || ||||| || ||||||||| | ||| Sbjct 742104 GTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAAGTCAATCCTGGCATCAAACC 742045 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 || ||||| | |||||| || | | || || || || |||||||| || || ||| Sbjct 742044 ACGTTTCTTGAGCCAGAAGATGGAAGCGAAAGATCCTGAAAAGAAGATACCTTCGACAGC 741985 Query 126178 CGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCA-AACCACTTCATC 126235 ||||| || | | | ||| || || | | || || || | | | ||| || | Sbjct 741984 GGCGAAGGCGATCAATCTCTCGGCGAATGTTGATCG--TTCGTCTGAGATCCATTTGAGA 741927 Query 126236 GCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 ||||| | |||||||| ||||||| |||| ||| | ||| ||||| || || Sbjct 741926 GCCCAATCAGCCTTTTTGGCGATACATGGGATGGTGTCGATGGCTTCGAAAAG 741874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353375992400