Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq13 125 6e-24 seq1 118 1e-21 seq2 104 2e-17 >seq13 Length=1031976 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || ||||||||||||||||| || ||||| | ||| || ||| |||||||| Sbjct 993623 ATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGATAAAGTTCTACCATCTTCCAATTG 993564 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||| || ||| | ||||||| || ||||| || || || || ||||| ||||||||||| Sbjct 993563 TTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGGATACCCTCTTTGTCTTGAATTTT 993504 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || || || || || |||||||| || | || || ||||| Sbjct 993503 AGACTTGACATTGTCGATAGTATCAGATGATTCAACTTCGAGGGTGATAGTCTTTCCGGT 993444 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || ||||||||||| Sbjct 993443 GAGGGTTTTGACGAAAATTTGCAT 993420 Score = 109 bits (120), Expect = 5e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 ||| || || || | || || | ||| || || || |||||||||||||| ||||| Sbjct 993930 TCCACCACGTAGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGA 993871 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 | |||| || ||| ||||| ||||| || || | || | || ||| ||||| || || Sbjct 993870 CAAGGTTCTACCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGG 993811 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGA 45291 || |||||||||||||| ||||| ||| | || | || | || || || || |||| Sbjct 993810 GATACCTTCTTTATCTTGGATTTTGGATTTAA-CGTTATCGATAGTATCAGAGGATTCGA 993752 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGA 45320 ||||||| || | ||||| ||||| ||| Sbjct 993751 CTTCGAGGGTGATGGTTTTACCGGTAAGA 993723 >seq1 Length=2409791 Score = 118 bits (130), Expect = 1e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || || |||||||||||||| || ||||| | ||| || || |||||||| Sbjct 586127 ATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACCGTCTTCCAATTG 586186 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||| || ||| | ||||| ||||| ||||| || || || |||||||||||||| | ||| Sbjct 586187 TTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGGA-TTT 586245 Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 | | || | || | || | ||||||||| ||||| || ||||| || | ||||| || | Sbjct 586246 TGGATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGAGGGTGATGGTTTTACCCG 586305 Query 45316 TTAG 45319 | || Sbjct 586306 TAAG 586309 >seq2 Length=2299803 Score = 104 bits (114), Expect = 2e-17 Identities = 106/136 (78%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| ||||||||||| || ||| | || |||||||| ||||| || || || |||||||| Sbjct 838549 ATCTTCCAATTGTTTACCAGCGAAAATTAATCGTTGTTGGTCTGGTGGGATTCCTTCTTT 838608 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 |||||| || || ||||| || | || | ||||||||| || ||||| |||||||||| Sbjct 838609 ATCTTGGATCTTGGATTTGA-CGTTGTCGATGGTGTCGGATGATTCGACCTCGAGAGTAA 838667 Query 45304 CCGTTTTGCCGGTTAG 45319 || || || || || Sbjct 838668 TGGTCTTTCCCGTGAG 838683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003030498800