Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq8 138 1e-27 seq13 107 2e-18 >seq8 Length=1407489 Score = 138 bits (152), Expect = 1e-27 Identities = 535/829 (65%), Gaps = 25/829 (3%) Strand=Plus/Plus Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTC 116408 || ||||| || ||||| |||||||| ||||| || | | ||||| | ||| | |||| Sbjct 619723 TTCTTGGTAACGACCTTGGTGATTTCGTGAAGTTTCTTGAAATCATACACT-CTCTTCTC 619781 Query 116409 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 116468 | |||| | ||| || || | || || |||||||| |||| | ||||| Sbjct 619782 CATGTCGACAAAGGCAGGGAGAGCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGG 619841 Query 116469 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT---CTTAATGGTGCCCAAGTT 116525 ||| ||| || || ||||| |||||||| || ||| ||| || || || ||| | Sbjct 619842 GGCAGAGTATTCGATGATTTCAGTACACAAGTT---ACTTGACTTGATTGTACC-AAGAT 619897 Query 116526 CTTT-TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCT 116584 || || || || || | ||| || |||||||| ||||| | || | || |||| Sbjct 619898 GTTGGTGGTTGGATTTGGAGTTGGCAGCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCT 619957 Query 116585 CCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTC 116644 | ||||| | | ||||||||| ||| | | ||| | || | || Sbjct 619958 CGGTTTGAGCTTCGAGAATAGCGAACCAAAGTTTTTGAGCTTTGATGGTCTTTCTACCTT 620017 Query 116645 GCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGA 116704 || | | |||||| | ||| || | | |||| |||| | | || | | Sbjct 620018 TACCAGCTTTCTCGTATGATTCGTAAAGCTCGACGAACTTTTCAGAGTGAACATCGGCAA 620077 Query 116705 GCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764 | ||||| | | ||||||| | ||| | ||| | ||| | | || || ||||||| Sbjct 620078 GACCTGGACATTCAGCTGGACACATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCA 620137 Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824 |||| || || ||||||||||| || |||| | ||| ||| ||| ||||||| | | Sbjct 620138 TGAAAAGATCAGGGATCCAGAGAGCGTAGAACAAATCACGAGCTCGAACTTCTTCTTTAC 620197 Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884 | ||||| ||| | || | || || | | ||| |||||||| ||||| ||||| | Sbjct 620198 CGTGATTTTTACGGAGATCGAGGAAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGA 620257 Query 116885 CCGCGATTGACCCCTTGCGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTA 116940 |||| | | ||| | | |||| | |||| || || || || || |||| Sbjct 620258 TAGCGAAAG-CACCTGGTCTCTTGTTACCACCTTGGTCGACGTATCTGGCGGTAGCGTCG 620316 Query 116941 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAG 116998 || | | ||||||||||| |||||| | ||| | || || || || || || || Sbjct 620317 AAAGCTCTAAGCATTGGAACGATACCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAA 620376 Query 116999 ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 117058 || || || | || | ||||||||| | ||| ||||| || || || ||||||| Sbjct 620377 CCT--TTAGCACGGATGTTGTGGATGTGGAGACCGATACCACCAGCAGTTTTAGAGATTT 620434 Query 117059 GTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC---ACCCTTATTTGCGA 117115 | || || | | | | || ||||||| || || || || || | || | || | Sbjct 620435 GAGCACAAATCTTCAAAGTGTCGTAGATACCGTCAATGGAATCTGAAGCC---ATGGCAA 620491 Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 117164 |||||| || ||||||||| | |||||||| |||||||| || Sbjct 620492 CGAGGAAACATGACGACATTTGAGCGTGAGGTGTACCGGCGTTGAAAAG 620540 >seq13 Length=1031976 Score = 107 bits (118), Expect = 2e-18 Identities = 166/235 (71%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| ||||| || ||||||||||||||||| || ||||| || |||||||| | ||| Sbjct 742104 GTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAAGTCAATCCTGGCATCAAACC 742045 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 || ||||| | |||||| || | | || || || || |||||||| || || ||| Sbjct 742044 ACGTTTCTTGAGCCAGAAGATGGAAGCGAAAGATCCTGAAAAGAAGATACCTTCGACAGC 741985 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAA---GGAGCGGGACTTTGTATCA-AACCACTTCA 127706 ||||| || | | | |||||| || || || || || | | | ||| || | Sbjct 741984 GGCGAAGGCGATCAATCTCTCGGCGAATGTTGATCG----TTCGTCTGAGATCCATTTGA 741929 Query 127707 TCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAG 127761 ||||| | |||||||| |||||||||||| ||| | ||| ||||| || || Sbjct 741928 GAGCCCAATCAGCCTTTTTGGCGATACATGGGATGGTGTCGATGGCTTCGAAAAG 741874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506969934800