Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq8 105 2e-17 seq13 87.8 4e-12 >seq8 Length=1407489 Score = 105 bits (116), Expect = 2e-17 Identities = 172/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827 ||||||||||| | |||||||| | ||| ||| | |||||| | | ||| | | Sbjct 619924 GCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATAGCGAAC 619983 Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887 ||||||| ||| ||||| | ||| |||| || | || |||| |||||| || || Sbjct 619984 CAAAGTTTTTGAGCTTTGATGGTCTTTCTACCTTTACCAGCTTTCTCGTATGATTCGTAA 620043 Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947 || || |||| | | || || ||| ||||||| ||| ||| ||||| | | Sbjct 620044 AGCTCGACGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACATTCAGCTGGACACATG 620103 Query 167948 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 168007 || |||||| |||||||| ||||| | ||||||||| || || | |||| | ||| Sbjct 620104 AGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCCAGAGAGCG 620163 Query 168008 TAGAACAA 168015 |||||||| Sbjct 620164 TAGAACAA 620171 >seq13 Length=1031976 Score = 87.8 bits (96), Expect = 4e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || ||||||||||||| ||||| |||| ||| || || |||||||||| ||| Sbjct 993905 TGAAGTGTAGACTCCTTTTGGATATTGTAATCAGACAAGGTTCTACCATCTTCCAACTGT 993846 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||| |||||||| | || ||||| || || |||||| || || || || Sbjct 993845 TTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGGATACCTTCTTTATCTTGGATTTTG 993786 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 || ||| |||| || || | | ||| || || | ||||| || ||||| || Sbjct 993785 GATTTAACGTTATCGATAGTATCAGAGGATTCGACTTCGAGGGTGATGGTTTTACCGGTA 993726 Query 199607 AGA 199609 ||| Sbjct 993725 AGA 993723 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| ||||| ||||| || |||||||||||||| || || ||| | |||||||| Sbjct 993824 AAAGACTCATCTTTGCCGGTAAACAGTTGGAAGATGGTAGAACCTTGTCTGATTACAATA 993883 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTT 201020 |||| || |||||||| ||||| | ||||| Sbjct 993884 TCCAAAAGGAGTCTACACTTCATTTGGTTTT 993914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921146852010