Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq13 122 9e-23 seq1 105 7e-18 >seq13 Length=1031976 Score = 122 bits (134), Expect = 9e-23 Identities = 180/255 (71%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 |||||| |||| | ||| ||||| || || || | || || || | ||| ||||| Sbjct 742137 CAAATGAGTGAAGAGCAAACAAGCGAAATCAGTGTGAAGACCTTCATCACGGGAGATGAG 742078 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 ||||||| ||||||||| || ||||| | || ||||| |||||||| || |||| || Sbjct 742077 TTCGTTGGAGAAAGTCAATCCTGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAAGC 742018 Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055 |||| || |||||||||| || ||||| || ||||| || | || | |||| |||| Sbjct 742017 GAAAGATCCTGAAAAGAAGATACCTTCGACAGCGGCGAAGGCGATCAATCTCTCGGCGAA 741958 Query 133056 CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115 || | | || | | |||||| || ||||| || ||||||| || || || Sbjct 741957 TGTTGATCGTTCGTCTGAGATCCATTTGAGAGCCCAATCAGCCTTTTTGGCGATACATGG 741898 Query 133116 CATCGTTTCGATGGC 133130 || || |||||||| Sbjct 741897 GATGGTGTCGATGGC 741883 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || || ||||| |||||| | || ||||| | | Sbjct 992964 ATGCAAATCTTTGTTAAAACTCTTACTGGTAAAACTATCACCCTTGAAGTCGAATCTTCA 993023 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| ||||| || |||| ||||| || |||||||| | ||||| Sbjct 993024 GACACCATTGATAACG-TTAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCA 993082 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | |||| ||| || ||||| | || || | || || ||| ||| ||||| Sbjct 993083 ACAGCGTTTGATTTTCGCTGGTAAACAATTAGAGGATGGTCGTACACTCTCCGATTACAA 993142 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||| ||||| ||| | || || || ||||| || Sbjct 993143 CATTCAAAAAGAATCCACCCTCCACTTGGTTCT 993175 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || || ||||||||||| | || || || | || Sbjct 993192 ATGCAAATCTTCGTCAAAACTCTTACTGGTAAAACCATCACTTTGGAAGTTGAATCATCC 993251 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| ||||| || |||| ||||||||||| || || | || || Sbjct 993252 GACACCATCGACAACG-TTAAATCCAAGATCCAAGACAAAGAGGGTATCCCACCAGATCA 993310 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | |||| ||| || ||||| | || |||| || || ||| |||||||| Sbjct 993311 ACAAAGATTGATTTTCGCCGGTAAACAATTAGAGGACGGTCGTACACTCTCAGACTACAA 993370 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||| ||||| ||| | || || |||||||| || Sbjct 993371 CATTCAAAAAGAATCAACCCTTCATTTGGTTCT 993403 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 || || || |||||||||||| |||| ||||| || | || | | | |||| |||| Sbjct 993724 CTTACCGGTAAAACCATCACCCTCGAAGTCGAATCCTCTGATACTATCGATAACG-TTAA 993782 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 | ||||||| || ||||| || || ||| | |||||||| | ||||| | || || Sbjct 993783 ATCCAAAATCCAAGATAAAGAAGGTATCCCCCCAGACCAACAAAGACTCATCTTTGCCGG 993842 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 |||||| |||| || | | ||| | || ||||| ||||||||||| | || || Sbjct 993843 TAAACAGTTGGAAGATGGTAGAACCTTGTCTGATTACAATATCCAAAAGGAGTCTACACT 993902 Query 38444 GCATTTGGT 38452 |||||||| Sbjct 993903 TCATTTGGT 993911 >seq1 Length=2409791 Score = 105 bits (116), Expect = 7e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 || ||||| |||||||||||| |||| || ||| | |||||| | | | |||| |||| Sbjct 586309 CTTACGGGTAAAACCATCACCCTCGAGGTTGAGTCATCCGACACCATCGATAACG-TTAA 586251 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 | ||||||| || ||||| || || || | |||||||| || | || | ||| || Sbjct 586250 ATCCAAAATCCAAGATAAAGAAGGTATCCCACCAGACCAACAACGTTTGATCTTCGCTGG 586191 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||||| |||| |||| | || || || |||||||||||||||||| | || || Sbjct 586190 TAAACAATTGGAAGACGGTAGAACTCTTTCAGATTACAACATCCAAAAGGAATCTACCCT 586131 Query 38444 GCATTTGGTGCT 38455 |||||||| || Sbjct 586130 TCATTTGGTTCT 586119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172612435200