Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq8 154 2e-32 seq13 102 1e-16 seq3 82.4 9e-11 >seq8 Length=1407489 Score = 154 bits (170), Expect = 2e-32 Identities = 542/831 (65%), Gaps = 29/831 (3%) Strand=Plus/Plus Query 110206 TTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCC 110265 ||||| || || ||| |||||||| || ||||| | | |||| || | || ||||| Sbjct 619723 TTCTTGGTAACGACCTTGGTGATTTCGTGAAGTTTCTTGAAATCATACACTCTCTTCTCC 619782 Query 110266 TTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325 | | |||| | |||||||||| ||| || ||||| || |||| || ||| | Sbjct 619783 ATGTCGACAAAGGCAGGGAGAGCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGGG 619842 Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACT---CTTAATGACACCCAAGTTC 110382 | | |||||| | ||||| ||||||||||| ||| ||| || ||| ||| | Sbjct 619843 GCAGAGTATTCGATGATTTCAGTACACAAGTT---ACTTGACTTGATTGTACC-AAGATG 619898 Query 110383 TTC-TGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTC 110441 || || || |||||||||||| || ||||| || |||||| | ||| | ||||| || Sbjct 619899 TTGGTGGTTGGATTTGGAGTTGGCAGCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTC 619958 Query 110442 CGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAG 110501 || || | | |||||| || ||| | | || || || || | Sbjct 619959 GGTTTGAGCTTCGAGAATAGCGAACCAAAGTTTTTGAGCTTTGATGGTCTTTCTACCTTT 620018 Query 110502 ACCTTCCTCCTCGTACTTGGT--GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAA 110559 ||| | | |||||| || | ||| | || | || | | || ||||| | | Sbjct 620019 ACCAGCTTTCTCGTA--TGATTCGTAAAGCTCGACGAACTTTTCAGAGTGAACATCGGCA 620076 Query 110560 AGACCCTTCGCCTTGT-CGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTT 110618 ||||| | | || | ||||| | ||||| ||||| |||| | | || || | ||| Sbjct 620077 AGACC-TGGACATTCAGCTGGACACATGAGGGTCCAATCTCCATCGGCTTCGACACGCTT 620135 Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATC 110678 |||||| || ||||| ||||| | || |||| | ||||| ||| | ||||| | Sbjct 620136 CATGAAAAGATCAGGGATCCAGAGAGCGTAGAACAAATCACGAGCTCGAACTTCTTCTTT 620195 Query 110679 ACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA 110738 ||| || || || || || | || || | | ||| | ||||||||||||||| || Sbjct 620196 ACCGTGATTTTTACGGAGATCGAGGAAATCGAAAACATCGGCGTGCCATGGTTCGAGGTA 620255 Query 110739 GACAGCGA-------TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGG 110791 || ||||| ||| || ||| || || | |||| || || | || || | Sbjct 620256 GATAGCGAAAGCACCTGG-TCTCTTGTTACCAC---CTTGGTCGACGTATCTGGCGGTAG 620311 Query 110792 CATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-T 110850 | | ||| | || ||||| |||| || || | || | ||| || ||||| ||| | Sbjct 620312 CGTCGAAAGCTCTAAGCATTGGAACGATACCGTTAGAGTAACCGTTGGTACCGGCAATGT 620371 Query 110851 CTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTA 110910 || || | || ||||| |||| |||||| || | ||| |||||||| || ||| Sbjct 620372 ATGAACCT-TTAGCACGGATGTTGTGGATGTGGAGACCGATACCACCAGCAGTTTTAGAG 620430 Query 110911 ATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGC 110969 ||||| |||| | ||| | | || | || ||||| ||||| ||||||| |||| Sbjct 620431 ATTTGAGCACAAATCT-TCAAAGTGTCGTAGATACCGTCAATGGAATCTGAAGCCATGGC 620489 Query 110970 AATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAG 111020 || || || || || ||||| |||| |||| || || || ||||| || Sbjct 620490 AACGAGGAAACATGACGACATTTGAGCGTGAGGTGTACCGGCGTTGAAAAG 620540 >seq13 Length=1031976 Score = 102 bits (112), Expect = 1e-16 Identities = 163/231 (71%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||| |||||||| || |||||||| || || ||| | ||| ||||| | || Sbjct 742103 TGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAAGTCAATCCTGGCATCAAACCA 742044 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | |||||| ||||| ||||||| | ||| ||| ||||||||||| || || ||| | Sbjct 742043 CGTTTCTTGAGCCAGAAGATGGAAGCGAAAGATCCTGAAAAGAAGATACCTTCGACAGCG 741984 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTT-GTC---GAACCACTTGAGAGC 119683 ||||| |||| | | ||| || || || || || ||| || ||| |||||||| Sbjct 741983 GCGAAGGCGATCAATCTCTCGGC-GAATGTTGATCGTTCGTCTGAGATCCATTTGAGAGC 741925 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 ||| | ||||| | || || |||| || | ||||||||||||||| Sbjct 741924 CCAATCAGCCTTTTTGGCGATACATGGGATGGTGTCGATGGCTTCGAAAAG 741874 >seq3 Length=1969235 Score = 82.4 bits (90), Expect = 9e-11 Identities = 218/327 (67%), Gaps = 11/327 (3%) Strand=Plus/Minus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647 || ||||||| |||||||| || | ||| || | ||| |||||| |||||||| Sbjct 644752 TGCCGAAACCATCCATTTCGACAAGCAACTGATTCAGTGTCGATTCACGTTCATCGTTTC 644693 Query 11648 -AGGGCAT--ACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATA 11704 | | || ||| ||| ||| ||||||| || ||||||||||||| || | Sbjct 644692 CACCGAATTGACCGCCTTTTCCACGAGCTTTACCGATCGCATCAATCTCATCGACAAAGA 644633 Query 11705 CGATACACGGT---TGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTC 11761 |||||| ||| || || | || | |||| || || | ||||| | | Sbjct 644632 TGATACAGGGTGCGTGTTTTTTA---GCGTTGGCGAATAGATCCCTCACACGGGATGGAC 644576 Query 11762 CAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTA 11820 | ||||| ||||||||||| ||||| | || ||| |||| || | ||| ||||| | | Sbjct 644575 CGACACCAACGAACATCTCCACGAATTCTGAACCAG-ACACCGATAAGAAAGGAACTTGA 644517 Query 11821 GACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGA 11880 | || |||||| | ||| ||| | || || ||||| |||||||| | ||| | | Sbjct 644516 GCTTCTCCAGCGGTAGCTTTAGCTAACAGCGTTTTACCGGTACCAGGAGGACCTGACAAG 644457 Query 11881 AGGGCGCCACGGGGGATCTTGGCACCA 11907 | || || || || || ||||| ||| Sbjct 644456 ATTGCTCCTCGAGGTATTTTGGCTCCA 644430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975779134000