Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq13 156 9e-33 seq1 125 2e-23 seq2 116 8e-21 >seq13 Length=1031976 Score = 156 bits (172), Expect = 9e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | ||| || ||||| ||||||||||| |||||||||| || || | || Sbjct 993179 TCTGAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTACGACC 993120 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||| || | || ||||| ||||| || | || ||||||||||| ||||| ||||| || Sbjct 993119 ATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTT 993060 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||| || || || ||||| ||||||||||| ||| ||| ||||||||||| | Sbjct 993059 GTCTTGGATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGAT 993000 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || | |||||| || || | |||||| Sbjct 992999 AGTTTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||| || || ||||| || |||||||| | | |||||| |||||||| | || Sbjct 993622 TGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGATAAAGTTCTACCATCTTCCAATTGT 993563 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| |||||||| | || ||||||||||| || || || ||||||||||||||||| Sbjct 993562 TTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGGATACCCTCTTTGTCTTGAATTTTA 993503 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||| || || || || || || ||| ||||| ||||| | |||||||| || Sbjct 993502 GACTTGACATTGTCGATAGTATCAGATGATTCAACTTCGAGGGTGATAGTCTTTCCGGTG 993443 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | |||||| Sbjct 993442 AGGGTTTTGACGAAAATTTGCAT 993420 Score = 136 bits (150), Expect = 9e-27 Identities = 136/174 (78%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATC 194987 ||||| | ||||| || ||||| ||||| ||||||||||| | |||| ||||| ||||| Sbjct 993914 AAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGACAAG-GTTCTACCATC 993856 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||| ||||| || ||||| |||| |||||||||||| || || |||||||| || Sbjct 993855 TTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGGATACCTTCTTTATC 993796 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||| ||||| || ||||| || || || || || ||| ||||| ||||| Sbjct 993795 TTGGATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGACTTCGAGGGT 993742 Score = 131 bits (144), Expect = 4e-25 Identities = 114/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 194960 TATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTT 195019 || ||||||||| |||||| | || |||||||| || ||||| ||||| || | |||| Sbjct 992866 TACTGTAATCGGAAAGAGTACGGCCGTCTTCGAGTTGTTTACCGGCGAAAATCAAACGTT 992807 Query 195020 GTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGT 195079 |||||||||| || || |||||||||||||| || || ||||||||| |||||||||| Sbjct 992806 GTTGGTCTGGTGGGATTCCTTCTTTGTCTTGGATCTTAGACTTGACGTTGTCAATGGTGT 992747 Query 195080 CCGAACTTTCCACTTCAAGGGT 195101 | ||| || || |||||||| Sbjct 992746 CTGAAGACTCGACCTCAAGGGT 992725 Score = 114 bits (126), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | ||||| || || ||||||||||| ||||| || | || || | || Sbjct 993407 TCTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAGAGTGTACGACC 993348 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 || || | || ||||| ||||| || | || |||||| ||||| || || || ||||| Sbjct 993347 GTCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACCCTCTTT 993288 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||| || || || ||||| || |||||||| || ||| ||||| | || | Sbjct 993287 GTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGATGATTCAACTTCCAAAGTGAT 993228 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || | |||||| ||||| | |||||| Sbjct 993227 GGTTTTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 93.3 bits (102), Expect = 9e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| || | ||||||||| || ||||| | || ||||| || ||||| | ||||||| Sbjct 992538 TGTAGTCTGAAAGAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTT 992479 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 | || || || || ||||| ||||||||||| || ||||| || ||||||||||| | Sbjct 992478 GATCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAG 992419 Query 195083 AACTTTCCACTTCAAGGGT 195101 | ||| || || || || Sbjct 992418 AGGATTCAACCTCGAGTGT 992400 >seq1 Length=2409791 Score = 125 bits (138), Expect = 2e-23 Identities = 134/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | ||||| || || || ||||| || |||||||| | ||||||||| || Sbjct 586115 TCTAAGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACC 586174 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||||| | || ||||| |||||||| | |||||||||||||| || || |||||||| Sbjct 586175 GTCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTT 586234 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| ||||| || ||||| || |||||||| || || || || ||||| Sbjct 586235 ATCTTGGATTTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAACCTCGAGGGT 586291 >seq2 Length=2299803 Score = 116 bits (128), Expect = 8e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| || | ||| ||||| |||||||| | || ||||| ||||| || | |||||||| Sbjct 838527 TGTAGTCAGAAAGTGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATTAATCGTTGTT 838586 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 ||||||| || || |||||||| ||||| || || |||||||| || |||||||| | Sbjct 838587 GGTCTGGTGGGATTCCTTCTTTATCTTGGATCTTGGATTTGACGTTGTCGATGGTGTCGG 838646 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| || || || |||| |||||||| || Sbjct 838647 ATGATTCGACCTCGAGAGTAATGGTCTTTCCCGT 838680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481173543010