Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq8 134 2e-26 seq5 113 5e-20 seq13 100 3e-16 >seq8 Length=1407489 Score = 134 bits (148), Expect = 2e-26 Identities = 422/648 (65%), Gaps = 14/648 (2%) Strand=Plus/Plus Query 47877 AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATT 47936 || || | ||| || |||||||| ||||| || |||| ||| || |||| || ||| Sbjct 619801 AGAGCAAGAGAGGCGAGATTACAAACAGCGACTTCATCTGGGGCAGAGTATTCGATGATT 619860 Query 47937 TCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGT 47994 |||| ||| | |||| | ||||| ||||| | || ||| || || ||| | | Sbjct 619861 TCAGTACACAAGTTACTTGACTTGATTGTACCAAGATGTTGGTGGTTGGATTTGGAGT-T 619919 Query 47995 TACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAG 48054 || ||||||||||||||||| || || | ||||| || | |||| ||| | |||| Sbjct 619920 GGCA-GCGTCCTTGTAAAGCATGAAGGGGTTGCCAGTCTCGGTTTGAGCTTCGAGAATAG 619978 Query 48055 ATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTAT--TT 48112 ||||| | ||| || || |||| ||||| | | | |||||| || Sbjct 619979 CGAACCAAAGTTTTTGAGCTTTGATGGTCTTTCTACCTTTACCAGCTTTCTCGTATGATT 620038 Query 48113 AGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGG 48172 ||| | || | || | || | |||| | | || ||||||||| || Sbjct 620039 CGTAAAG--CTCGACGAACTTTTCAGAGTGAACATCGGCAAGACCTGGACATTCAGCTGG 620096 Query 48173 ACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCA 48232 |||||| | | |||||| |||| || || | |||| || | ||| || ||||| Sbjct 620097 ACACATGAGGGTCCAATCTCCATCGGCTTCGACACGCTTCATGAAAAGATCAGGGATCCA 620156 Query 48233 AAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTA---AG 48289 ||||| || ||||| | || || | |||||| || || ||| |||| || Sbjct 620157 GAGAGCGTAGAACAAATCACGAGCTCGAACTTCTTCTTTACCGTGATT---TTTACGGAG 620213 Query 48290 TTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGG 48349 || || || || | | ||| || ||||||||||| | || || || | ||||||| Sbjct 620214 ATCGAGGAAATCGAAAACATCGGCGTGCCATGGTTCGAGGTAGATAGCGAAAGCACCTGG 620273 Query 48350 TCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGG 48409 || || ||||| ||||| || | |||||||| ||| || || |||| | |||||| Sbjct 620274 TCTCTTGTTACCACCTTGGTCGACGTATCTGGCGGTAGCGTCGAAAGCTCTAAGCATTGG 620333 Query 48410 GACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATT 48469 || ||||| || || ||| ||||| || | ||| || || |||| | || || Sbjct 620334 AACGATACCGTTAGAGTAACCGTTGGTACCGGCAATGTATGAACCTTTAGCACGGATGTT 620393 Query 48470 ACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACA 48517 || | ||| |||||||| || ||||||| ||| ||||||| Sbjct 620394 GTGGATGTGGAGACCGATACCACCAGCAGTTTTAGAGATTTGAGCACA 620441 >seq5 Length=1604251 Score = 113 bits (124), Expect = 5e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 ||||| |||||||| ||||| || || ||||| |||||||||||||||| ||||| || Sbjct 1486538 CCCTCATCTCTACTGATCAACTCGTTCGAAAACGTTAAACCAGGCATCAAACCTCTCTTC 1486597 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || ||||| || |||| || || || || |||||||| || ||||| || ||||| ||| Sbjct 1486598 TTCAACCAAAAGATAGCTGCGAAAGAACCTGAAAAGAAGATCCCTTCGACAGCTGCGAAA 1486657 Query 19102 GC 19103 || Sbjct 1486658 GC 1486659 >seq13 Length=1031976 Score = 100 bits (110), Expect = 3e-16 Identities = 220/327 (67%), Gaps = 2/327 (1%) Strand=Plus/Minus Query 18868 GTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGATACAACTCTATCTTCA 18927 ||||| ||||||||||| || || || || ||| ||||| | || | ||| Sbjct 742211 GTAAGGAATTCTTGTTCAATCTTGACAGCTTCTCTGATAATCTTCTCGACAGTTTCTGGG 742152 Query 18928 TTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCG 18987 | |||| | | | ||| | || | |||||| || |||||| || || || || Sbjct 742151 TGAGGACGTCTTCTCAAATGAGTGAAGAGCAAACAAGCGAAATCAGTGTGAAGACCTTCA 742092 Query 18988 TCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAAC 19047 || | || | ||| || || || || || || ||||||| || | ||| || | | Sbjct 742091 TCACGGGAGATGAGTTCGTTGGAGAAAGTCAATCCTGGCATCAAACCACGTTTCTTGAGC 742032 Query 19048 CAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACT 19107 ||||| || ||||| || ||||| |||||||| |||||||| || || || || || | Sbjct 742031 CAGAAGATGGAAGCGAAAGATCCTGAAAAGAAGATACCTTCGACAGCGGCGAAGGCGATC 741972 Query 19108 AGTCTTTCTCCATAACTAGCATCATTATTATGA-ATCCATTTCAGTGCCCAATCAGCCTT 19166 | ||| || | | | | ||| || | ||| |||||||| || |||||||||||||| Sbjct 741971 AATCTCTCGGCGAATGTTG-ATCGTTCGTCTGAGATCCATTTGAGAGCCCAATCAGCCTT 741913 Query 19167 CTTTTTTACACATGGCATTGTCTCTAT 19193 || | |||||| || || || || Sbjct 741912 TTTGGCGATACATGGGATGGTGTCGAT 741886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108589209200