Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2 120 2e-21 seq13 114 1e-19 seq1 105 5e-17 >seq2 Length=2299803 Score = 120 bits (132), Expect = 2e-21 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 ||| || ||||| || || || || || ||||| |||||||||||||||||||||||||| Sbjct 1610744 AGTCATCACTGTCCCCGCTTACTTCAACGACTCTCAACGTCAAGCTACTAAAGATGCTGG 1610685 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 || ||||| ||| | ||||| ||| ||||||| ||||| ||||| ||||| || || Sbjct 1610684 TTCCATCGCTGGTCTTGAGGTTCTCCGTGTTATCAACGAACCAACTGCCGCTGCTCTCGC 1610625 Query 550522 ATATGGACTTGATAAA 550537 || || ||||| ||| Sbjct 1610624 TTACGGTCTTGACAAA 1610609 Score = 104 bits (114), Expect = 2e-16 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || ||||| || || || ||||| ||||||| ||||| || |||||||| |||||| Sbjct 1154219 GTCCCAGCTTACTTCAACGACTCTCAACGTCTCGCTACCAAGGATGCTGGTGCCATTGCT 1154160 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 || ||| | ||||| ||||| ||||| || || ||||||||||| |||| ||||| ||| Sbjct 1154159 GGTCTTGAGGTTCTCCGTATCATCAACGAGCCAACTGCTGCTGCCATTGCCTATGGTCTT 1154100 Query 550532 GA 550533 || Sbjct 1154099 GA 1154098 >seq13 Length=1031976 Score = 114 bits (126), Expect = 1e-19 Identities = 163/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAG 563311 |||||||| || || | |||||| || ||| ||||| || |||||||| | || || Sbjct 993640 CTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGG--ATGTTGTAATCCGATAAAG 993583 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 |||| |||||| | |||||| || || || || | ||| || || || || || || | Sbjct 993582 TTCTACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGGATAC 993523 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCG 563430 | ||||| ||||||||||| || || || || ||||||| ||| | | |||| Sbjct 993522 CCTCTTTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCAG-ATGATTCAACTTCG 993464 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | ||| || || || || ||||| ||||||||||||||| Sbjct 993463 AGGGTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCATA 993419 Score = 107 bits (118), Expect = 2e-17 Identities = 147/201 (73%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||| | || | |||||| ||| || ||||| ||||||||||||| | |||| Sbjct 993920 AGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGG--ATATTGTAATCAGACAAGGTTC 993863 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 | |||||| | ||||| |||||||| || |||||||| || || || || || |||| Sbjct 993862 TACCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGGATACCTT 993803 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433 |||||||||| ||||| ||| || || || ||||||| | || | | |||||| Sbjct 993802 CTTTATCTTGGATTTTGGATTTAACGTTATCGATAGTATCAGAG-GATTCGACTTCGAGG 993744 Query 563434 GTAACAGTTTTACCAGTAAGA 563454 || | |||||||| |||||| Sbjct 993743 GTGATGGTTTTACCGGTAAGA 993723 Score = 100 bits (110), Expect = 2e-15 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || | ||||||||| |||||| ||| ||||| || | || || | || Sbjct 993403 AGAACCAAATGAAGGGTTGATTCTTTTTGAATGTTGTAGTCTGAGAGTGTACGACCGTCC 993344 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || | |||||| ||||| ||||| | |||||| ||||| || || || || ||||| ||| Sbjct 993343 TCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGGATACCCTCTTTGTCT 993284 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGT 563441 || || || ||| || || || || || | ||| | | ||| | ||| | || Sbjct 993283 TGGATCTTGGATTTAACGTTGTCGATGGTGTCGGA-TGATTCAACTTCCAAAGTGATGGT 993225 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||||||||||||||||| ||||| ||||||||| Sbjct 993224 TTTACCAGTAAGAGTTTTGACGAAGATTTGCATA 993191 Score = 93.3 bits (102), Expect = 3e-13 Identities = 149/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| || ||||| |||||| ||| |||||||| | || || | ||| || | Sbjct 993170 CAAG-TGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTACGACCATCCTCTA 993112 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 |||||| || || ||||| | | || || || || ||||||||||| || ||||| | Sbjct 993111 ATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGA 993052 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTA 563445 | || ||| || ||||| || || | || | | ||| || || | ||||||| Sbjct 993051 TCTTGGATTTAACGTTATCAATGGTGTCTGAA-GATTCGACTTCAAGGGTGATAGTTTTA 992993 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||||||||||||||| || ||||||||| Sbjct 992992 CCAGTAAGAGTTTTAACAAAGATTTGCATA 992963 >seq1 Length=2409791 Score = 105 bits (116), Expect = 5e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 550045 TGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTC 550104 ||||||||| ||||| || ||||| |||||||||||| | | |||||||| | || Sbjct 1772097 TGGTAAAGTCGAAATCATCGCCAACGATCAAGGTAACCGTATCACTCCATCCTGGGTCGG 1772038 Query 550105 TTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCC 550164 |||||| || |||| | |||| ||||| ||||| ||| ||||||| || ||||| Sbjct 1772037 TTTCACCGATGAAGAACGTCTAGTCGGTGACGCAGCCAAAAATCAAGCACCTTCAAATCC 1771978 Query 550165 TACCAATACTATTTTTGATGCTAAACGTTTAATTGG 550200 || |||||||| || ||||||||||| || || Sbjct 1771977 CGTTAACACTATTTTCGACGCTAAACGTTTCATCGG 1771942 Score = 98.7 bits (108), Expect = 8e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123 ||||| || |||||||||||||| || ||||| ||||| |||||| || |||||| | Sbjct 1253373 GCCAACGACCAAGGTAACAGAACAACCCCATCCTATGTCGCTTTCAACGACTCTGAACGT 1253314 Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGAT 550183 | | |||||||| || || | |||| | | || || ||| || |||| || Sbjct 1253313 CTTATCGGTGATGCCGCTAAGAACCAAGTCGCCATGAACCCATACAACACCGTTTTCGAC 1253254 Query 550184 GCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCAT 550243 ||||||||||| || || |||| || || | ||||| ||||||||||||| Sbjct 1253253 GCTAAACGTTTGATCGGTAGAAAATTCGCAGACGCTGAAGTTCAATCAGATATGAAGCAC 1253194 Query 550244 TGGCCTTTC 550252 ||||||||| Sbjct 1253193 TGGCCTTTC 1253185 Score = 93.3 bits (102), Expect = 3e-13 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| ||||| || || || || || |||||||||||||| ||||| ||||| || Sbjct 1252976 ACTGTCCCAGCTTACTTCAACGATTCCCAACGTCAAGCTACCAAAGACGCTGGTATGATC 1252917 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| ||| | || || ||||| ||||| || || ||||| || || | || || || Sbjct 1252916 GCTGGTCTTGACGTCCTCCGTATCATCAACGAGCCAACTGCCGCCGCTATCGCTTACGGT 1252857 Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||||| || | | ||| ||| || || |||||||| ||| |||||| Sbjct 1252856 CTTGACAAGAAGACTGAAGGTGAAAAGAACGTCCTCATCTTCGATCTCGGAGGT 1252803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029294413464700