Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 4e-13 >seq13 Length=1031976 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||||||||||| |||||||| || || | ||| | || || Sbjct 993172 ACCAAGTGGAGGGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTACGACCATCCTCT 993113 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || || ||||| || || |||| |||||||| || | |||| || |||||||| Sbjct 993112 AATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGG 993053 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| || | | | | ||||| | || || || | || || ||||| Sbjct 993052 ATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGATAGTTTTA 992993 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | |||||| ||||| || ||||| Sbjct 992992 CCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| || || |||||||| || || ||| ||||| |||||||||||||| Sbjct 993929 CCACCACGTAGACGTAAAACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGAC 993870 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | ||| | | || |||||||| ||||||||||| || |||| ||||| || | ||| Sbjct 993869 AAGGTTCTACCATCTTCCAACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGG 993811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937460719690