Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-17 seq13 105 4e-17 seq2 105 4e-17 >seq1 Length=2409791 Score = 107 bits (118), Expect = 1e-17 Identities = 172/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 475905 TAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCC--TAT 475962 ||||| | |||||| || || | ||||| || ||||||| | | || |||| | | Sbjct 1770671 TAGGTATCGAAACAACCGGTGGTGTCATGACCAAACTTATTGGCCGTAA--CTCCGTTGT 1770614 Query 475963 CCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCAT 476022 |||| ||| ||||| || | || || || | ||| || ||| | || || | || Sbjct 1770613 CCCAACCAAGAAATCCCAAATCTTCTCTACCGCTGTTGACAACCAACCTACCGTTAGAAT 1770554 Query 476023 CCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAA 476082 ||| ||||||||||||||||| | | || || ||||| ||| || ||| ||| | Sbjct 1770553 TCAAGTCTTTGAAGGTGAAAGATCAATGACCAAGGATAACAACCTTCTCGGAGAGTTTGA 1770494 Query 476083 TCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATAT 476142 |||| | ||||| || ||||| | || ||||||||||| || ||||| ||||| || Sbjct 1770493 TCTTACAAACATTCCCCCAGCTCCTCGTGGTGTTCCTCAAATCGAGGTTACCTTTGAGAT 1770434 Query 476143 TGATG 476147 ||||| Sbjct 1770433 TGATG 1770429 Score = 105 bits (116), Expect = 4e-17 Identities = 157/222 (71%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 474401 GCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACAT 474460 ||||| ||||||||||| |||||||| ||||| ||||| |||| | || |||||| | Sbjct 1253373 GCCAACGACCAAGGTAACAGAACAACCCCATCCTATGTCGCTTTCAACGACTCTGAACGT 1253314 Query 474461 CTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGAT 474520 ||||| || ||||| ||||| | |||| || || || || || |||| || Sbjct 1253313 CTTATCGGTGATGCCGCTAAGAACCAAGTCGCCATGAACCCATACAACACCGTTTTCGAC 1253254 Query 474521 GCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCAT 474580 |||||| | ||||| ||| | || || | || | || ||||| |||||| || Sbjct 1253253 GCTAAACGTTTGATCGGTAGAAAATTCGCAGACGCTGAAGTTCAATCAGATATGAAGCAC 1253194 Query 474581 TGGCCTTTTAAGGT----GATAAATGTTGGTGGTAAACCATA 474618 |||||||| ||||| || ||| |||||||||||||| Sbjct 1253193 TGGCCTTTCAAGGTCGTTGACAAA----GGTGGTAAACCATA 1253156 Score = 102 bits (112), Expect = 5e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 ||||||| ||||| || || || ||||| ||||||||||| || ||||| || || | | Sbjct 1252978 TTACTGTCCCAGCTTACTTCAACGATTCCCAACGTCAAGCTACCAAAGACGCTGGTATGA 1252919 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | || |||||| | || | ||||| || || || ||||| || ||||| | ||||| | Sbjct 1252918 TCGCTGGTCTTGACGTCCTCCGTATCATCAACGAGCCAACTGCCGCCGCTATCGCTTACG 1252859 Query 474864 GTCTTGATAAGAATTCTGA 474882 ||||||| ||||| |||| Sbjct 1252858 GTCTTGACAAGAAGACTGA 1252840 >seq13 Length=1031976 Score = 105 bits (116), Expect = 4e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 |||||||| ||||| | ||| || |||||||| || | ||||||||||||||| || Sbjct 992527 AGAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGATCAGGTGGG 992468 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT 480725 || |||||||||||||||||||| ||||||| ||||| || |||| | | | Sbjct 992467 ATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAGGATTCAACC 992408 Query 480726 TCAAGGGTAATAGTTTTACCGGTGAG 480751 || || || || |||||||| ||||| Sbjct 992407 TCGAGTGTGATGGTTTTACCCGTGAG 992382 Score = 104 bits (114), Expect = 2e-16 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||||| || || | |||||| || ||| || | || ||||| | || |||||| Sbjct 993637 AGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCCGATAAAGTTCTA 993578 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 |||||| | ||| || ||||| || || | | ||||| || || || || || || Sbjct 993577 CCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGGATACCCTCT 993518 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGT 480733 ||||||||||| || |||||| || |||||||||| || | || || | ||||| Sbjct 993517 TTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCAGATGATTCAACTT-CGAGGGT 993459 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || |||||||| || || ||||||||||| Sbjct 993458 GATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTG 993423 Score = 100 bits (110), Expect = 2e-15 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || | ||| || ||||| ||||| | ||| ||||| || || |||||||||||||| Sbjct 993119 ATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTT 993060 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||| ||||| ||| || ||||| || || | | ||||||||| || Sbjct 993059 GTCTTGGATCTTGGATTTAACGTTATCAATGGTGTCTGAAGATTCGACTTCAAGGGTGAT 993000 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||| || ||||| ||||| || ||||| Sbjct 992999 AGTTTTACCAGTAAGAGTTTTAACAAAGATTTG 992967 >seq2 Length=2299803 Score = 105 bits (116), Expect = 4e-17 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 474739 AGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGG 474798 ||| || ||||| || || || || || || |||||||||||||| ||||||||||| || Sbjct 1610744 AGTCATCACTGTCCCCGCTTACTTCAACGACTCTCAACGTCAAGCTACTAAAGATGCTGG 1610685 Query 474799 AAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGC 474858 || || |||||| | ||| | ||| |||| || |||||||| || || || || || Sbjct 1610684 TTCCATCGCTGGTCTTGAGGTTCTCCGTGTTATCAACGAACCAACTGCCGCTGCTCTCGC 1610625 Query 474859 TTATGGTCTTGATAAGAA 474876 ||| |||||||| || || Sbjct 1610624 TTACGGTCTTGACAAAAA 1610607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177913154440