Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 seq9 95.1 1e-14 seq13 82.4 9e-11 >seq2 Length=2299803 Score = 116 bits (128), Expect = 4e-21 Identities = 246/356 (69%), Gaps = 21/356 (6%) Strand=Plus/Plus Query 13551 CCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAAT--CTGGAAAGTG 13608 ||||||| ||||||||| || || ||||| || ||| |||| || || ||| || Sbjct 1537702 CCGGTATCGTCAAGTTGGAAGATGCCAACAACGCCGGT--GGCAGAAATGCTAAAAACTG 1537759 Query 13609 TACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGT 13668 ||| |||||| | ||||| || ||||| || || | ||||| || | ||| | || || Sbjct 1537760 TACCCTCATTCTTACAGAAGGAGATTCAGCCAAGGCGCTCGCTGTATCCGGTTTATCAGT 1537819 Query 13669 CGTTGGTCGTGATCAC-TACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGG 13727 || |||||||| ||| |||||||| ||||||||||| ||||||| || || || | Sbjct 1537820 TGTCGGTCGTGA-CACATACGGTGTTTTCCCACTTCGTGGTAAATTGCTAAACGTCCGTG 1537878 Query 13728 ACGCTTCGGTGGCACAGCTCACATCAAACCAGGAG-TTCAACGATCTCAAGAAGATCCTT 13786 | ||| | ||| |||| |||| ||| |||||| || |||| |||| | Sbjct 1537879 AAGCTGGACACGATCAGATCACCAAAAACGTCGAGATTCAAC-ATATCAAACAGATTTTA 1537937 Query 13787 GGTCTTCAACAAGGAAAAGACT--ACCAAGATGTTTCTGA-ACTT--CGCTATGGTCGTC 13841 || | |||| ||| | |||| | |||| | || || ||||||| | Sbjct 1537938 GGATTGAAACATAATCAAGTTTACACCACCA-----CTGATAGTTTACGTTATGGTCATT 1537992 Query 13842 TTATGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGT---CTCATC 13894 | ||||| ||||||||| ||| |||||||||| || ||||||||| |||||| Sbjct 1537993 TGATGATCATGACAGATCAAGATCATGATGGTTCCCATATCAAGGGTTTGCTCATC 1538048 >seq9 Length=1334013 Score = 95.1 bits (104), Expect = 1e-14 Identities = 237/351 (68%), Gaps = 8/351 (2%) Strand=Plus/Minus Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 || ||||||||||| |||||| | ||||||||||| || ||||| ||||| || | Sbjct 1262575 TCGTGTTGAAGCATTCTCCACATACCCTCAACATAGTCTTTTGCATGTCCCCAATCACGT 1262516 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACA-ATTTGTTTGAC 177737 || ||||| |||||| | | || || |||| ||| || | || | ||| Sbjct 1262515 TGAGAGTTGATGTTACCCAAGTAGAGAGTTTCACTCTTACCGG-CAGAGATCTCCGCGAC 1262457 Query 177738 -GC-CATCAGTAATCTTCTTTGTGACAAA-GTCGGCACCTCGTCTCGGTGATTCGTGGTT 177794 || | | || || || | ||||| || || | || ||||| || ||||||||||| Sbjct 1262456 TGCTCTTGAG--ATTTTTCTAGTGACGAATGTTCGT-CCACGTCTTGGAGATTCGTGGTT 1262400 Query 177795 GAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCA 177854 ||| || || ||| |||| ||||||| || ||||||| ||| || |||| ||| Sbjct 1262399 GAAAAGAATACCGTTACAGGTGAACATACCGTATGATTCTCTGTAGTTGACAACGATCCA 1262340 Query 177855 GTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGT 177914 || ||| | ||| | || ||| |||| ||||||||| || || || | Sbjct 1262339 GTAGGCGTAAAGTTTAGCACAACCGTAGGGAGATCTTGGGTAGAATGGAGTGGTTTCTGA 1262280 Query 177915 TTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| |||||||| |||||||| | | || || ||||| |||||||| Sbjct 1262279 TTGAGGAGTTTCAACAACTTTACCGTAAAGTTCAGAGGTTGAAGCTTGGTA 1262229 >seq13 Length=1031976 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 || ||||||||| | || | |||||||| | || ||||| | ||||| | |||||| Sbjct 741877 TTCGAAGCCATCGACACCATCCCATGTATCGCCAAAAAGGCTGATTGGGCTCTCAAATGG 741936 Query 65050 TT-TGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGG 65108 | | | || || || | ||||||||| | | | || || || ||| || || Sbjct 741937 ATCTCAGACGAACGATCAA-CATTCGCCGAGAGATTGATCGCCTTCGCCGCTGTCGAAGG 741995 Query 65109 TATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCC 65168 ||||||||| || || || ||| | || | ||| | ||||| || ||| | ||||| Sbjct 741996 TATCTTCTTTTCAGGATCTTTCGCTTCCATCTTCTGGCTCAAGAAACGTGGTTTGATGCC 742055 Query 65169 AGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 ||| | ||||| || ||||| || ||||| ||||| ||||| ||| Sbjct 742056 AGGATTGACTTTCTCCAACGAACTCATCTCCCGTGATGAAGGTCTTCAC 742104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569376286400