Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20fagi_20[genbank_20GCA_5F001599715.1_202016-03-01] 30 sequences; 22,649,946 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq13 143 5e-29 seq1 104 4e-17 seq2 95.1 2e-14 >seq13 Length=1031976 Score = 143 bits (158), Expect = 5e-29 Identities = 174/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | |||| ||| |||| ||| | || | ||||| ||| || Sbjct 993428 AATTTGCATACCACCACGTAATCTAAGAACCAAATGAAGGGTTGATTCTTTTTGAATGTT 993369 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | | || ||||||||||| ||||| ||||| ||||| ||||| Sbjct 993368 GTAGTCTGAGAGTGTACGACCGTCCTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTG 993309 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || || ||||| ||||| || |||| ||| | || || || ||||| Sbjct 993308 ATCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGATTTAACGTTGTCGATGGTGTCGGA 993249 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||| | ||| || |||||||| || || ||||| || || |||||||| Sbjct 993248 TGATTCAACTTCCAAAGTGATGGTTTTACCAGTAAGAGTTTTGACGAAGATTTGCAT 993192 Score = 143 bits (158), Expect = 5e-29 Identities = 174/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| | ||||| |||| ||| | || | || || || || Sbjct 993656 AATTTGCATACCACCTCTGAGACGAAGGACCAAATGAAGAGTTGATTCCTTTTGGATGTT 993597 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || ||||| |||||| ||| || |||||||| || || || || ||||||||||| Sbjct 993596 GTAATCCGATAAAGTTCTACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTG 993537 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || || ||||| ||||| ||||| | || | ||| |||||||| || Sbjct 993536 GTCTGGTGGGATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCGATAGTATCAGA 993477 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||| || || ||||| || || || || ||||| || || |||||||| Sbjct 993476 TGATTCAACTTCGAGGGTGATAGTCTTTCCGGTGAGGGTTTTGACGAAAATTTGCAT 993420 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | |||| || |||| || | || | ||||| ||| || Sbjct 993199 ATTTGCATACCACCACGTAATCTGAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTG 993140 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || ||||| | || | | ||| ||||||||||| || || ||||| || | |||||| Sbjct 993139 TAATCGGAGAGTGTACGACCATCCTCTAATTGTTTACCAGCGAAAATCAAACGCTGTTGG 993080 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || |||||||| || ||||| || |||| ||| | || ||| || || ||| Sbjct 993079 TCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGATTTAACGTTATCAATGGTGTCTGAA 993020 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || ||||||||||| || || ||||| ||||| |||||||| Sbjct 993019 GATTCGACTTCAAGGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 992964 Score = 123 bits (136), Expect = 4e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||| ||| | ||||| ||| || ||||| || || || || |||||| ||| || Sbjct 993911 ACCAAATGAAGTGTAGACTCCTTTTGGATATTGTAATCAGACAAGGTTCTACCATCTTCC 993852 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 || ||||| |||||||| || | ||| ||||| || || || || |||||||||||||| Sbjct 993851 AACTGTTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGGATACCTTCTTTATCTTGG 993792 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 ||||||| ||| | || |||||||| || || || ||||| || || || |||||| Sbjct 993791 ATTTTGGATTTAACGTTATCGATAGTATCAGAGGATTCGACTTCGAGGGTGATGGTTTTA 993732 Query 193332 CCTGTTAG 193339 || || || Sbjct 993731 CCGGTAAG 993724 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | |||||| || || |||||||| || ||||| || || | |||||| Sbjct 992536 TAGTCTGAAAGAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGA 992477 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || || ||||| || ||||| || |||| ||| | ||| ||| || || || Sbjct 992476 TCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAG 992417 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAG 193339 || ||||| || || || || |||||||| || || Sbjct 992416 GATTCAACCTCGAGTGTGATGGTTTTACCCGTGAG 992382 >seq1 Length=2409791 Score = 104 bits (114), Expect = 4e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| | |||| ||| |||| ||| | |||| || || || || || || || Sbjct 586103 ACCACCACGTAATCTAAGAACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAATCTGA 586162 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | |||||| || || |||||||| || || || || || | ||||| || || || Sbjct 586163 AAGAGTTCTACCGTCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGGTCTGGTGG 586222 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||||||||| ||||||| ||| | || || || ||||| |||||||| Sbjct 586223 GATACCTTCTTTATCTTGGATTTTGGATTTAACGTTATCGATGGTGTCGGATGACTCAAC 586282 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAG 193339 || || || || |||||||| || || Sbjct 586283 CTCGAGGGTGATGGTTTTACCCGTAAG 586309 >seq2 Length=2299803 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | ||||| ||| || |||||||| || || |||||||||| ||||| Sbjct 838529 TAGTCAGAAAGTGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATTAATCGTTGTTGG 838588 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || ||||||||||||||||| || |||| ||| | || || || ||||| Sbjct 838589 TCTGGTGGGATTCCTTCTTTATCTTGGATCTTGGATTTGACGTTGTCGATGGTGTCGGAT 838648 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAG 193339 || || || || ||||| || || || || || || Sbjct 838649 GATTCGACCTCGAGAGTAATGGTCTTTCCCGTGAG 838683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654062629600